RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 SLC22A15Q8IZD6 547 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 CARFQ8N187 725 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 LMNTD1Q8N9Z9 388 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 OR5K2Q8NHB8 316 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 CD200R1Q8TD46 325 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 STMN2Q93045 179 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 TRAPPC9Q96Q05 1148 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 SHCBP1LQ9BZQ2 653 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 STOML1Q9UBI4 398 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 NKX1-2Q9UD57 310 aaPredicted RBP16.89■□□□□ 0.29
MRPL28-208ENST00000469744 SLC7A8Q9UHI5 535 aa16.89■□□□□ 0.29
MRPL28-208ENST00000469744 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.89■□□□□ 0.29
MRPL28-208ENST00000469744 PIPSLA2A3N6 862 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 B8ZZF3 427 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 TMEM150CB9EJG8 249 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 PYCARD-AS1I3L0S3 204 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 TSPAN12O95859 305 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 JUNP05412 331 aaKnown RBP16.88■□□□□ 0.29
MRPL28-208ENST00000469744 RPS17P08708 135 aaKnown RBP16.88■□□□□ 0.29
MRPL28-208ENST00000469744 CHRM5P08912 532 aaPredicted RBP16.88■□□□□ 0.29
MRPL28-208ENST00000469744 FURINP09958 794 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 GFAPP14136 432 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 UGT2B7P16662 529 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 SHMT2P34897 504 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 POLE2P56282 527 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 SLC25A3Q00325 362 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 DNASE1L3Q13609 305 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 CUL3Q13618 768 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 ERV3-1Q14264 604 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 AAGABQ6PD74 315 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 SPESP1Q6UW49 350 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.88■□□□□ 0.29
MRPL28-208ENST00000469744 SLC38A9Q8NBW4 561 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 OR1L3Q8NH93 324 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 WDR60Q8WVS4 1066 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 FCRL4Q96PJ5 515 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 TACO1Q9BSH4 297 aaKnown RBP16.88■□□□□ 0.29
MRPL28-208ENST00000469744 KLHL42Q9P2K6 505 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 GNPTGQ9UJJ9 305 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 TSR3Q9UJK0 312 aaKnown RBP16.88■□□□□ 0.29
MRPL28-208ENST00000469744 C15orf41Q9Y2V0 281 aa16.88■□□□□ 0.29
MRPL28-208ENST00000469744 TMEM233B4DJY2 109 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 SUPT3HB4E1H0 165 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 E5RI56 91 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 UBFD1O14562 309 aaKnown RBP16.87■□□□□ 0.29
MRPL28-208ENST00000469744 CPNE3O75131 537 aaKnown RBP16.87■□□□□ 0.29
MRPL28-208ENST00000469744 NIPSNAP2O75323 286 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 FKBP6O75344 327 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 SUPT3HO75486 399 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 GPC4O75487 556 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 AOAHP28039 575 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 CLCN7P51798 805 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 RPS18P62269 152 aaKnown RBP16.87■□□□□ 0.29
MRPL28-208ENST00000469744 PLOD1Q02809 727 aaPredicted RBP16.87■□□□□ 0.29
MRPL28-208ENST00000469744 PFKFB4Q16877 469 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 UGT3A2Q3SY77 523 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 BPHLQ86WA6 291 aaPredicted RBP16.87■□□□□ 0.29
MRPL28-208ENST00000469744 MYLK4Q86YV6 388 aaPredicted RBP16.87■□□□□ 0.29
MRPL28-208ENST00000469744 ASZ1Q8WWH4 475 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 FAM136AQ96C01 138 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 CATSPER2Q96P56 530 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 OR2A14Q96R47 310 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 FANCEQ9HB96 536 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 NUDT4Q9NZJ9 180 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 STX18Q9P2W9 335 aaKnown RBP16.87■□□□□ 0.29
MRPL28-208ENST00000469744 POLG2Q9UHN1 485 aa16.87■□□□□ 0.29
MRPL28-208ENST00000469744 COPG1Q9Y678 874 aaKnown RBP16.87■□□□□ 0.29
MRPL28-208ENST00000469744 LOC100653049A0A140TA62 436 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 VPS4BO75351 444 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 KRT34O76011 436 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 CHRM3P20309 590 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 PEBP1P30086 187 aaKnown RBP16.86■□□□□ 0.29
MRPL28-208ENST00000469744 MC1RQ01726 317 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 LCP2Q13094 533 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 TSNQ15631 228 aaKnown RBP16.86■□□□□ 0.29
MRPL28-208ENST00000469744 DEFB110Q30KQ9 67 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 KANK2Q63ZY3 851 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 RIPOR1Q6ZS17 1223 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 PRICKLE2Q7Z3G6 844 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 SNX32Q86XE0 403 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 HOMEZQ8IX15 550 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 FAM20CQ8IXL6 584 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 C2orf73Q8N5S3 287 aaPredicted RBP16.86■□□□□ 0.29
MRPL28-208ENST00000469744 FLVCR1-AS1Q8TAF5 88 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 ZNF483Q8TF39 744 aaPredicted RBP16.86■□□□□ 0.29
MRPL28-208ENST00000469744 JADE3Q92613 823 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 MR1Q95460 341 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 LINGO1Q96FE5 620 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 IL17FQ96PD4 163 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 PANX3Q96QZ0 392 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 SERPINI1Q99574 410 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 ACTL8Q9H568 366 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 EFCAB1Q9HAE3 211 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 FAM60AQ9NP50 221 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 LATS2Q9NRM7 1088 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 STARD5Q9NSY2 213 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 GEMIN8Q9NWZ8 242 aaKnown RBP16.86■□□□□ 0.29
MRPL28-208ENST00000469744 UTP6Q9NYH9 597 aaKnown RBP16.86■□□□□ 0.29
MRPL28-208ENST00000469744 SEC16AO15027 2179 aa16.86■□□□□ 0.29
MRPL28-208ENST00000469744 CDC14CA4D256 554 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms