RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 TRBV5-4A0A0C4DH59 114 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 A0A1W2PPV9 198 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 PINLYPA6NC86 204 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 TRIM64A6NGJ6 449 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 OR51F1A6NGY5 319 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 TRIM64BA6NI03 449 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 A6NNC1 897 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 KDM4EB2RXH2 506 aaPredicted RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 H0YGG7 62 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 I3L1I5 382 aaPredicted RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 P2RX6O15547 441 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 DYRK3O43781 588 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 NME2P1O60361 137 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 DNAJB6O75190 326 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 AP2A1O95782 977 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 RAF1P04049 648 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 CYP1A2P05177 515 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 ZNF24P17028 368 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 CD53P19397 219 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 TFEBP19484 476 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 CD9P21926 228 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 MC4RP32245 332 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 SLC26A3P40879 764 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 ARHGAP25P42331 645 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 ZNF140P52738 457 aaPredicted RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 ARF3P61204 181 aaPredicted RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 NKX6-1P78426 367 aaPredicted RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 OC90Q02509 493 aaPredicted RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 SPARCL1Q14515 664 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 PDK2Q15119 407 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 TAF1AQ15573 450 aaPredicted RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 SF1Q15637 639 aaKnown RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 PRTGQ2VWP7 1150 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 FAM214AQ32MH5 1076 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 TCTE1Q5JU00 501 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 ZDHHC20Q5W0Z9 365 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 DENND5AQ6IQ26 1287 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 LRRC8BQ6P9F7 803 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 CPEB2Q7Z5Q1 589 aaKnown RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 CXorf67Q86X51 503 aaPredicted RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 ZDHHC13Q8IUH4 622 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 BVESQ8NE79 360 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 OR10Q1Q8NGQ4 319 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 OR5K2Q8NHB8 316 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 CFAP61Q8NHU2 1237 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 ELMO1Q92556 727 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 MMABQ96EY8 250 aaPredicted RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 VPS50Q96JG6 964 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 DNAJC1Q96KC8 554 aaKnown RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 ZNF354BQ96LW1 612 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 FCRL5Q96RD9 977 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 CYTH2Q99418 400 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 MACROD1Q9BQ69 325 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 UTP23Q9BRU9 249 aaKnown RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 TUBB6Q9BUF5 446 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 VN1R1Q9GZP7 353 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 MRPL47Q9HD33 250 aaKnown RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 PFDN2Q9UHV9 154 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 RUVBL2Q9Y230 463 aaKnown RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 RUVBL1Q9Y265 456 aaKnown RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 R3HDM2Q9Y2K5 976 aaKnown RBP4.95□□□□□ -1.62
PTPN4-209ENST00000469511 EMC9Q9Y3B6 208 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 LIPGQ9Y5X9 500 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 NFS1Q9Y697 457 aa4.95□□□□□ -1.62
PTPN4-209ENST00000469511 A0A087X0T9 212 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 IGKV1-8A0A0C4DH67 115 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 LRRD1A4D1F6 860 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 KLHL33A6NCF5 533 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 IQCF5A8MTL0 148 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 RNF212BA8MTL3 300 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 ARHGEF33A8MVX0 844 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 NPIPA2E9PIF3 369 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 NPIPA3F8WFD2 350 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 MYO1FO00160 1098 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 OR1I1O60431 355 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 SLC25A12O75746 678 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 PROSCO94903 275 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 EPOP01588 193 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 FAM228BP0C875 321 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 C8orf89P0DMQ9 161 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 GLI4P10075 376 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TPH1P17752 444 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 ACRV1P26436 265 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 HSD3B2P26439 372 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TPP2P29144 1249 aaPredicted RBP4.94□□□□□ -1.62
PTPN4-209ENST00000469511 CCR7P32248 378 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 ADRA1AP35348 466 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 KIR2DL3P43628 341 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 BDKRB1P46663 353 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 CLCN7P51798 805 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 ITGA8P53708 1063 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 WNT3P56703 355 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 GPR85P60893 370 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 KRTAP1-1Q07627 177 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 KLHL30Q0D2K2 578 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 RPA4Q13156 261 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 KEAP1Q14145 624 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 MESDQ14696 234 aa4.94□□□□□ -1.62
PTPN4-209ENST00000469511 TAZQ16635 292 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms