RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ASIC5Q9NY37 505 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF226Q9NYT6 803 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 TMCC3Q9ULS5 477 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 POLR3HQ9Y535 204 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 PDCD11Q14690 1871 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 PLXNA1Q9UIW2 1896 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 BTAF1O14981 1849 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 PRAMEF33A0A0G2JMD5 474 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 A0A1B0GTL3 188 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 SLC22A23A1A5C7 686 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 MPTX1A8MV57 137 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 GFRA2O00451 464 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 SCAMP3O14828 347 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 PLOD3O60568 738 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 PRAMEF10O60809 474 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 MPC2O95563 127 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ANXA8P13928 327 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 DARSP14868 501 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF81P51508 661 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 NUDT6P53370 316 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ATP12AP54707 1039 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ERVFC1P60507 584 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 OSTNP61366 133 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 BAATQ14032 418 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 DMC1Q14565 340 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 TMEM132DQ14C87 1099 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 NR6A1Q15406 480 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 MEDAGQ5VYS4 303 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 RNLSQ5VYX0 342 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 RNF165Q6ZSG1 346 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 PIM3Q86V86 326 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 SLC44A2Q8IWA5 706 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ADGRF3Q8IZF5 1079 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF655Q8N720 491 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 TMEM145Q8NBT3 493 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ATP6V1C2Q8NEY4 427 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 SIPA1Q96FS4 1042 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ASIC4Q96FT7 647 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 SCMH1Q96GD3 660 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 ERMAPQ96PL5 475 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 KCNC2Q96PR1 638 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 OR2M2Q96R28 347 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 KCNH6Q9H252 994 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 IMPAD1Q9NX62 359 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 SIRT5Q9NXA8 310 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 COA4Q9NYJ1 87 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 PLEKHB1Q9UF11 243 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 DUSP12Q9UNI6 340 aa8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 LSM2Q9Y333 95 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 CFAP20Q9Y6A4 193 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-207ENST00000469334 IGKV6D-21A0A0A0MT36 114 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 M0QYT0 321 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 CBX4O00257 560 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 SP4Q02446 784 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 HNRNPA0Q13151 305 aaKnown RBP8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 ETFDHQ16134 617 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 FAM187BQ17R55 369 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 RANBP10Q6VN20 620 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 HSD17B13Q7Z5P4 300 aaPredicted RBP8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 UBE2J2Q8N2K1 259 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 RYBPQ8N488 228 aaPredicted RBP8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 LRRC71Q8N4P6 559 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 MS4A15Q8N5U1 240 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 DCBLD1Q8N8Z6 715 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 OR2T4Q8NH00 348 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 SPATA22Q8NHS9 363 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 CEP76Q8TAP6 659 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF419Q96HQ0 510 aaPredicted RBP8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 SLC2A13Q96QE2 648 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 MYOCQ99972 504 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 PITHD1Q9GZP4 211 aaPredicted RBP8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 FZD8Q9H461 694 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 AMBNQ9NP70 447 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 CLN6Q9NWW5 311 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 MS4A12Q9NXJ0 267 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 MPP6Q9NZW5 540 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 NDRG3Q9UGV2 375 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 PFDN2Q9UHV9 154 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 ZNF225Q9UK10 706 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 PCDHGA2Q9Y5H1 932 aa8.71□□□□□ -1.01
SMARCE1-207ENST00000469334 ALPK3Q96L96 1907 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 H3BM21 787 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 M0R233 179 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 GNB5O14775 395 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 LZTS3O60299 673 aaPredicted RBP8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 TPST2O60704 377 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 CDRT1O95170 752 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 MEOX2P50222 304 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 CLCN4P51793 760 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 HK3P52790 923 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 ACLYP53396 1101 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 CDC42P60953 191 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 VLDLRP98155 873 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 LAMTOR4Q0VGL1 99 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 MLLT11Q13015 90 aaPredicted RBP8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 PCBP1Q15365 356 aaKnown RBP eCLIP8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 FAM174BQ3ZCQ3 159 aa8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 LGALSLQ3ZCW2 172 aaPredicted RBP8.71□□□□□ -1.02
SMARCE1-207ENST00000469334 PRR5LQ6MZQ0 368 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms