RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 SPNS1Q9H2V7 528 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 RAD21L1Q9H4I0 556 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 REEP4Q9H6H4 257 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 YY1AP1Q9H869 796 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 COPS7BQ9H9Q2 264 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-205ENST00000469129 SERHLQ9NQF3 203 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 C8orf4Q9NR00 106 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 GPR27Q9NS67 375 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 CCM2LQ9NUG4 571 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-205ENST00000469129 VAPAQ9P0L0 249 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 SLAMF8Q9P0V8 285 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 ANKMY1Q9P2S6 941 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 ZNF282Q9UDV7 671 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-205ENST00000469129 EGFL7Q9UHF1 273 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 ANAPC2Q9UJX6 822 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 VPS4AQ9UN37 437 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 SNX7Q9UNH6 387 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 INVSQ9Y283 1065 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 CA5BQ9Y2D0 317 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 PCDHGA2Q9Y5H1 932 aa8.96□□□□□ -0.98
SMC1A-205ENST00000469129 ARHGEF17Q96PE2 2063 aaPredicted RBP8.96□□□□□ -0.98
SMC1A-205ENST00000469129 IGHV1OR15-9A0A0B4J2B8 117 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 KIR2DS5A0A0G2JLQ3 304 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 A0A0G2JNG1 304 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 SPTY2D1-AS1A0A0U1RR47 76 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 ELOVL7A1L3X0 281 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 A6NCN8 305 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 KIR2DS3K7RE56 304 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 CAPN5O15484 640 aaPredicted RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 OR1F1O43749 312 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TBX19O60806 448 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 CHRM5P08912 532 aaPredicted RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 ZCCHC18P0CG32 403 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 THEGLP0DJG4 465 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 HOXB9P17482 250 aaPredicted RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 GGT1P19440 569 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 PEX2P28328 305 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 AHRP35869 848 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TSFMP43897 325 aaKnown RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TRA2BP62995 288 aaKnown RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 CSNK1G2P78368 415 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TGM3Q08188 693 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 PDE7AQ13946 482 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 KIR2DS3Q14952 304 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 KIR2DS5Q14953 304 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 PLCL1Q15111 1095 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 CYP51A1Q16850 503 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TMEM31Q5JXX7 168 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 DEPDC1Q5TB30 811 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 SLC30A9Q6PML9 568 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 ARMCX6Q7L4S7 300 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 ERMP1Q7Z2K6 904 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 VN1R5Q7Z5H4 357 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 PARGQ86W56 976 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 AMIGO1Q86WK6 493 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 MSRB3Q8IXL7 192 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 MICU2Q8IYU8 434 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TRIML2Q8N7C3 387 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 ICA1LQ8NDH6 482 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 SRFBP1Q8NEF9 429 aaKnown RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 ZNF548Q8NEK5 533 aaPredicted RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TRPV3Q8NET8 790 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 OR2L3Q8NG85 312 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 OR7A2PQ8NGA2 310 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 OR52E4Q8NGH9 312 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 GPBAR1Q8TDU6 330 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 C16orf78Q8WTQ4 265 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 GFM2Q969S9 779 aaKnown RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TSACCQ96A04 125 aaPredicted RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 RGMAQ96B86 450 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 PPWD1Q96BP3 646 aaKnown RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 BIRC7Q96CA5 298 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 PPCDCQ96CD2 204 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 COQ8BQ96D53 544 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 REXO5Q96IC2 774 aaKnown RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 EGLN2Q96KS0 407 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 SPACA7Q96KW9 195 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 BTBD9Q96Q07 612 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 SARGQ9BW04 601 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TMEM168Q9H0V1 697 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 OR51B5Q9H339 312 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 SRMSQ9H3Y6 488 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 Q9H521 79 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 XKR8Q9H6D3 395 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 MIEF1Q9NQG6 463 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 AASDHPPTQ9NRN7 309 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 SLC25A37Q9NYZ2 338 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TBC1D29Q9UFV1 150 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 CNOT11Q9UKZ1 510 aaKnown RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 PCDHGB4Q9UN71 923 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 NEUROG3Q9Y4Z2 214 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 AP1M2Q9Y6Q5 423 aa8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TDRD6O60522 2096 aaKnown RBP8.95□□□□□ -0.98
SMC1A-205ENST00000469129 TCRBV5S2A0A599 114 aa8.94□□□□□ -0.98
SMC1A-205ENST00000469129 ISM1B1AKI9 464 aa8.94□□□□□ -0.98
SMC1A-205ENST00000469129 H0YJX3 145 aa8.94□□□□□ -0.98
SMC1A-205ENST00000469129 H7BY64 318 aa8.94□□□□□ -0.98
SMC1A-205ENST00000469129 PLPP1O14494 284 aa8.94□□□□□ -0.98
SMC1A-205ENST00000469129 PRICKLE3O43900 615 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms