RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TEKQ02763 1124 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 MBTPS1Q14703 1052 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 EIF4HQ15056 248 aaKnown RBP12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 SSX1Q16384 188 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 EXOC3L2Q2M3D2 409 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 HKDC1Q2TB90 917 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 ZNF544Q6NX49 715 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 ZNF367Q7RTV3 350 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 LGI4Q8N135 537 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 OR9Q2Q8NGE9 314 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 CRELD1Q96HD1 420 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 P2RY13Q9BPV8 354 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 DUSP26Q9BV47 211 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 BBS2Q9BXC9 721 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 ATG10Q9H0Y0 220 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 POFUT2Q9Y2G5 429 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 WBP11Q9Y2W2 641 aaKnown RBP12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 GABRR3A8MPY1 467 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 ADAMDEC1O15204 470 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 CAPN5O15484 640 aaPredicted RBP12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 TBL1XO60907 577 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 GUCY1B2O75343 617 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 GPX5O75715 221 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 SEMA3DO95025 777 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 KRT75O95678 551 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 JUPP14923 745 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 PCSK2P16519 638 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 SOX6P35712 828 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 CSKP41240 450 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 NSG1P42857 185 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 CASP9P55211 416 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 CDH12P55289 794 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 OLR1P78380 273 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 PRKCZQ05513 592 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 HSPA14Q0VDF9 509 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 GPR50Q13585 617 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 TPGS1Q6ZTW0 290 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 PAF1Q8N7H5 531 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 SKA2Q8WVK7 121 aaPredicted RBP12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 ASB11Q8WXH4 323 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 ALG14Q96F25 216 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 MTERF1Q99551 399 aaKnown RBP12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 MGLLQ99685 303 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 SLC30A2Q9BRI3 323 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 CCDC32Q9BV29 185 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 CCDC177Q9NQR7 707 aaPredicted RBP12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 DNAJC11Q9NVH1 559 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 DUSP12Q9UNI6 340 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 CFL2Q9Y281 166 aa12.51□□□□□ -0.41
PDZRN3-205ENST00000466780 PLK4O00444 970 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 ARHGAP33O14559 1287 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 SCAMP2O15127 329 aaKnown RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 MFN2O95140 757 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 ANXA8P13928 327 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 ELNP15502 786 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 RFX2P48378 723 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 SPIBQ01892 262 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 CSTF3Q12996 717 aaKnown RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 MED22Q15528 200 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 CLPPQ16740 277 aaPredicted RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 MICAQ29983 383 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 TOR1AIP1Q5JTV8 583 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 PRSS55Q6UWB4 352 aaPredicted RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 RFLNAQ6ZTI6 216 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 TAS1R1Q7RTX1 841 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 DEPDC4Q8N2C3 294 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 C11orf24Q96F05 449 aaPredicted RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 ST6GAL2Q96JF0 529 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 SNX18Q96RF0 628 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 MCCC1Q96RQ3 725 aaPredicted RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 COPS8Q99627 209 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 SPATA9Q9BWV2 254 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 CDCA4Q9BXL8 241 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 TRAPPC4Q9Y296 219 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 PLXNB3Q9ULL4 1909 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 NPIPB15A6NHN6 443 aaPredicted RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 A8MV72 311 aaPredicted RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 POU2F1P14859 743 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 GATMP50440 423 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 C21orf58P58505 322 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 PFN3P60673 137 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 RACK1P63244 317 aaKnown RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 BCL2L1Q07817 233 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 DMPKQ09013 629 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 DDX39BQ13838 428 aaKnown RBP12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 TMC5Q6UXY8 1006 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 ZNF783Q6ZMS7 281 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 OR8H2Q8N162 312 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 WDR20Q8TBZ3 569 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 BHMTQ93088 406 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 TAPBPLQ9BX59 468 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 GPATCH2Q9NW75 528 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 IMPAD1Q9NX62 359 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 ZDHHC3Q9NYG2 299 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 VPS29Q9UBQ0 182 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 MUTYHQ9UIF7 546 aa12.5□□□□□ -0.41
PDZRN3-205ENST00000466780 BTNL2Q9UIR0 455 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms