RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 SYT1P21579 422 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 ZNF135P52742 658 aaPredicted RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 EMP2P54851 167 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 MAXP61244 160 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 OC90Q02509 493 aaPredicted RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 KLC1Q07866 573 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 STIM1Q13586 685 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 MAPKAPK3Q16644 382 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 MEP1AQ16819 746 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 DEFB110Q30KQ9 67 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 PDLIM3Q53GG5 364 aaPredicted RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 RAB6CQ53S08 254 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 TMEM177Q53S58 311 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 TCTE1Q5JU00 501 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 ACER2Q5QJU3 275 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 METRNLQ641Q3 311 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 SARM1Q6SZW1 724 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 SPESP1Q6UW49 350 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 KDELC1Q6UW63 502 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 UNC5DQ6UXZ4 953 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 GALNTL5Q7Z4T8 443 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 AMIGO1Q86WK6 493 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 GSPT2Q8IYD1 628 aaKnown RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 PPM1NQ8N819 430 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 ANKRD53Q8N9V6 530 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 TTC29Q8NA56 475 aaPredicted RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 MDS2Q8NDY4 140 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 LPCAT1Q8NF37 534 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 SGMS2Q8NHU3 365 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 STT3BQ8TCJ2 826 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 CREB3L4Q8TEY5 395 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 GCDHQ92947 438 aaPredicted RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 SLC7A6OSQ96CW6 309 aaPredicted RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 ZMYND19Q96E35 227 aaPredicted RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 VPS35Q96QK1 796 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 TUBB6Q9BUF5 446 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 ADGRE3Q9BY15 652 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 POLR1EQ9GZS1 481 aaKnown RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 WWP1Q9H0M0 922 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 RAB6CQ9H0N0 254 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 TFB2MQ9H5Q4 396 aaKnown RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 YAE1D1Q9NRH1 226 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 CUTCQ9NTM9 273 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 GPRC5BQ9NZH0 403 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 CTSFQ9UBX1 484 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 MTRF1LQ9UGC7 380 aaKnown RBP5.5□□□□□ -1.53
NCL-208ENST00000466274 PCDHA7Q9UN72 937 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 CHKBQ9Y259 395 aa5.5□□□□□ -1.53
NCL-208ENST00000466274 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.5□□□□□ -1.531e-23■□□□□ 10.9
NCL-208ENST00000466274 MDC1Q14676 2089 aaKnown RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 ANK2Q01484 3957 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 ANKRD36A6QL64 1941 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 UBE2QL1A1L167 161 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 MGAT4DA6NG13 374 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 KLRC4-KLRK1H3BQV0 150 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 IFRD1O00458 451 aaPredicted RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 BTN3A3O00478 584 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 ZNHIT1O43257 154 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 HEXBP07686 556 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 ITGAMP11215 1152 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 ERCC2P18074 760 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 TFEBP19484 476 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 GPD1P21695 349 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 ACVR2AP27037 513 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 PTGER1P34995 402 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 PRCPP42785 496 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 CDH6P55285 790 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 TMPRSS15P98073 1019 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 SNTB1Q13884 538 aaKnown RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 NFE2L1Q14494 772 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 COBLL1Q53SF7 1204 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 C2CD6Q53TS8 623 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 LDLRAP1Q5SW96 308 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 KAZNQ674X7 775 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 SPINK14Q6IE38 97 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 PRMT9Q6P2P2 845 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 ZNF449Q6P9G9 518 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 TRIM65Q6PJ69 517 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 FAM111BQ6SJ93 734 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 B3GNT6Q6ZMB0 384 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 RFX8Q6ZV50 586 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 COX15Q7KZN9 410 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 PRSS58Q8IYP2 241 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 BEST3Q8N1M1 668 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 PGBD5Q8N414 524 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 DNAJC22Q8N4W6 341 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 ROBO4Q8WZ75 1007 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 RNASE6Q93091 150 aaKnown RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 GFM2Q969S9 779 aaKnown RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 TMEM125Q96AQ2 219 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 PERPQ96FX8 193 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 RBM41Q96IZ5 413 aaKnown RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 SRPK1Q96SB4 655 aaKnown RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 DNAJC7Q99615 494 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 FOXB1Q99853 325 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 C11orf70Q9BRQ4 267 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 TTYH2Q9BSA4 534 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 SELENOOQ9BVL4 669 aa5.49□□□□□ -1.53
NCL-208ENST00000466274 TDRD1Q9BXT4 1180 aaKnown RBP5.49□□□□□ -1.53
NCL-208ENST00000466274 ZNF700Q9H0M5 742 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms