RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 AMER3Q8N944 861 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 OR5T3Q8NGG3 340 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 NT5CQ8TCD5 201 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 WDR34Q96EX3 536 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 PTCD3Q96EY7 689 aaKnown RBP11.07□□□□□ -0.64
CUX1-207ENST00000465461 DRC3Q9H069 523 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 NOL11Q9H8H0 719 aaKnown RBP11.07□□□□□ -0.64
CUX1-207ENST00000465461 IPPKQ9H8X2 491 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 ZBTB26Q9HCK0 441 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 PRM3Q9NNZ6 103 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 SEMA4BQ9NPR2 832 aaPredicted RBP11.07□□□□□ -0.64
CUX1-207ENST00000465461 HCN3Q9P1Z3 774 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 TRPC4Q9UBN4 977 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 DCDC2Q9UHG0 476 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 RNF11Q9Y3C5 154 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 NAALAD2Q9Y3Q0 740 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 SEC16AO15027 2179 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 LAMA5O15230 3695 aa11.07□□□□□ -0.64
CUX1-207ENST00000465461 KMT2BQ9UMN6 2715 aaPredicted RBP11.07□□□□□ -0.64
CUX1-207ENST00000465461 ZZEF1O43149 2961 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 A0A1B0GTL3 188 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 CCDC189A1A4V9 331 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 OR2W5A6NFC9 320 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 STX16-NPEPL1H3BU86 382 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 OR7A17O14581 309 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 STX16O14662 325 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 SPAG7O75391 227 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 RDH16O75452 317 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 JRKO75564 520 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 WFS1O76024 890 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 KLHL18O94889 574 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 TBX6O95947 436 aaPredicted RBP11.06□□□□□ -0.64
CUX1-207ENST00000465461 ONECUT2O95948 504 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 PIM1P11309 404 aaPredicted RBP11.06□□□□□ -0.64
CUX1-207ENST00000465461 CREB1P16220 341 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 CXCR2P25025 360 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 HNRNPH1P31943 449 aaKnown RBP11.06□□□□□ -0.64
CUX1-207ENST00000465461 ARL1P40616 181 aaPredicted RBP11.06□□□□□ -0.64
CUX1-207ENST00000465461 FOLR3P41439 243 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 AVPR1BP47901 424 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 ZNF844Q08AG5 666 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 CHAF1BQ13112 559 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 PWP1Q13610 501 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 RASA2Q15283 850 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 UGT8Q16880 541 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 DEFB134Q4QY38 66 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 UNC50Q53HI1 259 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 PRMT9Q6P2P2 845 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 TRABD2AQ86V40 505 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 SRRM1Q8IYB3 904 aaKnown RBP11.06□□□□□ -0.64
CUX1-207ENST00000465461 AMER2Q8N7J2 671 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 OR52B6Q8NGF0 335 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 STT3BQ8TCJ2 826 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 UTP15Q8TED0 518 aaKnown RBP11.06□□□□□ -0.64
CUX1-207ENST00000465461 TTC9Q92623 222 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 MTFMTQ96DP5 389 aaKnown RBP11.06□□□□□ -0.64
CUX1-207ENST00000465461 ZIM3Q96PE6 472 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 BBC3Q96PG8 261 aaPredicted RBP11.06□□□□□ -0.64
CUX1-207ENST00000465461 SPSB2Q99619 263 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 RBCK1Q9BYM8 510 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 SLC6A16Q9GZN6 736 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 EHD1Q9H4M9 534 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 ACTR8Q9H981 624 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 PPCSQ9HAB8 311 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 ANKHQ9HCJ1 492 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 PCTPQ9UKL6 214 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 CDC14AQ9UNH5 594 aa11.06□□□□□ -0.64
CUX1-207ENST00000465461 TNPO3Q9Y5L0 923 aaKnown RBP11.06□□□□□ -0.64
CUX1-207ENST00000465461 ANKDD1BA6NHY2 528 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 ARGFXA6NJG6 315 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 VSTM2BA6NLU5 285 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 G3V2L1 256 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 SAP18O00422 153 aaKnown RBP11.05□□□□□ -0.64
CUX1-207ENST00000465461 COPEO14579 308 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 GLRA3O75311 464 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 ALOX12BO75342 701 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 DNAJB5O75953 348 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 TGFB1P01137 390 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 PROCP04070 461 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 GSTA1P08263 222 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 RPS17P08708 135 aaKnown RBP11.05□□□□□ -0.64
CUX1-207ENST00000465461 ZGLP1P0C6A0 271 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 TAC1P20366 129 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 CASP2P42575 452 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 NEK2P51955 445 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 EFNA3P52797 238 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 BTN3A2P78410 334 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 MC1RQ01726 317 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 OCA2Q04671 838 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 SLC18A2Q05940 514 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 KLC1Q07866 573 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 RGS1Q08116 209 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 DDX39BQ13838 428 aaKnown RBP11.05□□□□□ -0.64
CUX1-207ENST00000465461 DSG2Q14126 1118 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 FAM53BQ14153 422 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 LY6DQ14210 128 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 TBCCQ15814 346 aa11.05□□□□□ -0.64
CUX1-207ENST00000465461 CPSF6Q16630 551 aaKnown RBP eCLIP11.05□□□□□ -0.64
CUX1-207ENST00000465461 HIST2H2ACQ16777 129 aaPredicted RBP11.05□□□□□ -0.64
CUX1-207ENST00000465461 KRT71Q3SY84 523 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms