RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 CREB3L4Q8TEY5 395 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 SREK1Q8WXA9 508 aaKnown RBP16.13■□□□□ 0.17
USP39-211ENST00000465282 FKBP10Q96AY3 582 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 C10orf90Q96M02 699 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 TMEM237Q96Q45 408 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 SLC6A16Q9GZN6 736 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 CHST8Q9H2A9 424 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 ZBTB26Q9HCK0 441 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 NDOR1Q9UHB4 597 aa16.13■□□□□ 0.17
USP39-211ENST00000465282 LOC101059948A0A1B0GTJ6 334 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 SRRM3A6NNA2 597 aaPredicted RBP16.12■□□□□ 0.17
USP39-211ENST00000465282 H0YIG0 161 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 OR7A17O14581 309 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 TERTO14746 1132 aaKnown RBP16.12■□□□□ 0.17
USP39-211ENST00000465282 TM9SF1O15321 606 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 SPAG7O75391 227 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 CD22P20273 847 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 DLSTP36957 453 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 PIK3CBP42338 1070 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 AVPR1BP47901 424 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 CRTC2Q53ET0 693 aaPredicted RBP16.12■□□□□ 0.17
USP39-211ENST00000465282 UNC50Q53HI1 259 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 C1orf189Q5VU69 101 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 LIPMQ5VYY2 423 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 ABHD13Q7L211 337 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 MILR1Q7Z6M3 343 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.12■□□□□ 0.17
USP39-211ENST00000465282 ZSCAN1Q8NBB4 408 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 ARMC2Q8NEN0 867 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 OR7G3Q8NG95 312 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 CT55Q8WUE5 264 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 SLC45A3Q96JT2 553 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 CLK4Q9HAZ1 481 aaKnown RBP16.12■□□□□ 0.17
USP39-211ENST00000465282 TMBIM4Q9HC24 238 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 ZNF304Q9HCX3 659 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 PSD3Q9NYI0 1048 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 IFT80Q9P2H3 777 aaPredicted RBP16.12■□□□□ 0.17
USP39-211ENST00000465282 GPN3Q9UHW5 284 aaPredicted RBP16.12■□□□□ 0.17
USP39-211ENST00000465282 CROTQ9UKG9 612 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 PADI2Q9Y2J8 665 aa16.12■□□□□ 0.17
USP39-211ENST00000465282 SCN3AQ9NY46 2000 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 CCDC88CQ9P219 2028 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 TRIM13O60858 407 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 NSA2O95478 260 aaKnown RBP16.11■□□□□ 0.17
USP39-211ENST00000465282 SERPIND1P05546 499 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 LIFP15018 202 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 CREB1P16220 341 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 PTPN4P29074 926 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 PKNOX1P55347 436 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 TMPRSS3P57727 454 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 PHEXP78562 749 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 MC1RQ01726 317 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 LCP2Q13094 533 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 DNASE1L3Q13609 305 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 NCF4Q15080 339 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 ST3GAL2Q16842 350 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 CFAP157Q5JU67 520 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 OVCH1Q7RTY7 1134 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 AFAP1L2Q8N4X5 818 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 KCT2Q8NC54 265 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 SRFBP1Q8NEF9 429 aaKnown RBP16.11■□□□□ 0.17
USP39-211ENST00000465282 OR52B6Q8NGF0 335 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 NSUN5Q96P11 429 aaKnown RBP16.11■□□□□ 0.17
USP39-211ENST00000465282 FAM111AQ96PZ2 611 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 ZNF382Q96SR6 550 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 SLC26A1Q9H2B4 701 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 WDR54Q9H977 334 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 AKIRIN1Q9H9L7 192 aaPredicted RBP16.11■□□□□ 0.17
USP39-211ENST00000465282 ANKHQ9HCJ1 492 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 SEMA4BQ9NPR2 832 aaPredicted RBP16.11■□□□□ 0.17
USP39-211ENST00000465282 PPT2Q9UMR5 302 aa16.11■□□□□ 0.17
USP39-211ENST00000465282 FARSAQ9Y285 508 aaKnown RBP16.11■□□□□ 0.17
USP39-211ENST00000465282 DSPP15924 2871 aaKnown RBP16.11■□□□□ 0.17
USP39-211ENST00000465282 LRIT2A6NDA9 550 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 FOXS1O43638 330 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 ZWINTO95229 277 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 MED26O95402 600 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 CAPN1P07384 714 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 ALOX12P18054 663 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 ARL1P40616 181 aaPredicted RBP16.1■□□□□ 0.17
USP39-211ENST00000465282 SLC18A1P54219 525 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 NAGLUP54802 743 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 CDH13P55290 713 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 TGM3Q08188 693 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 TRAF3Q13114 568 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 DSG2Q14126 1118 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 PCLAFQ15004 111 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 RBBP7Q16576 425 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 ADPRMQ3LIE5 342 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 AGBL2Q5U5Z8 902 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 FAM199XQ6PEV8 388 aaPredicted RBP16.1■□□□□ 0.17
USP39-211ENST00000465282 FAM198BQ6UWH4 519 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 CCDC81Q6ZN84 652 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 MYLK4Q86YV6 388 aaPredicted RBP16.1■□□□□ 0.17
USP39-211ENST00000465282 SNRNP27Q8WVK2 155 aaKnown RBP16.1■□□□□ 0.17
USP39-211ENST00000465282 TRMOQ9BU70 441 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 SLC17A7Q9P2U7 560 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 NXT1Q9UKK6 140 aaKnown RBP16.1■□□□□ 0.17
USP39-211ENST00000465282 RNF11Q9Y3C5 154 aa16.1■□□□□ 0.17
USP39-211ENST00000465282 LAMA5O15230 3695 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms