RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 MMP2P08253 660 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ATXN1LP0C7T5 689 aaKnown RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 S100A3P33764 101 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 HK3P52790 923 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 MLLT6P55198 1093 aaPredicted RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PER3P56645 1201 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 CLDN20P56880 219 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 RPL38P63173 70 aaKnown RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 VLDLRP98155 873 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 RGS1Q08116 209 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 EIF4EBP2Q13542 120 aaPredicted RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ABRAXAS2Q15018 415 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 LARS2Q15031 903 aaKnown RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PCBP1Q15365 356 aaKnown RBP eCLIP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 MED22Q15528 200 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 VMACQ2NL98 169 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 METAP1DQ6UB28 335 aaPredicted RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 MILR1Q7Z6M3 343 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 TAC4Q86UU9 113 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 GHDCQ8N2G8 530 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 LIX1Q8N485 282 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 TEX26Q8N6G2 289 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PNPLA1Q8N8W4 532 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 OR4M2Q8NGB6 313 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 OR4F6Q8NGB9 312 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 CCDC120Q96HB5 630 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 TNKS2Q9H2K2 1166 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 NT5MQ9NPB1 228 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SERHLQ9NQF3 203 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PDGFCQ9NRA1 345 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SIRT5Q9NXA8 310 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SH3BP4Q9P0V3 963 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SLC23A1Q9UHI7 598 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ING4Q9UNL4 249 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 MED16Q9Y2X0 877 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ALG5Q9Y673 324 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 COMMD10Q9Y6G5 202 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 CSNK1G3Q9Y6M4 447 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 LCTP09848 1927 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 RALGAPA2Q2PPJ7 1873 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SHROOM3Q8TF72 1996 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SCN1AP35498 2009 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 NCF1BA6NI72 391 aaPredicted RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 NCF1CA8MVU1 366 aaPredicted RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 GFRA2O00451 464 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PITPNM1O00562 1244 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 OR7A17O14581 309 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 NDUFS3O75489 264 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ARIH2O95376 493 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ASGR1P07306 291 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PRKAR1AP10644 381 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PRPS2P11908 318 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ODC1P11926 461 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 KCNE1P15382 129 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 CPT1AP50416 773 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 CLDN8P56748 225 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ITKQ08881 620 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 RIN1Q13671 783 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 GTF2H2Q13888 395 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 VEZF1Q14119 521 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SSX1Q16384 188 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 COL28A1Q2UY09 1125 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 GTDC1Q4AE62 458 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PLAG1Q6DJT9 500 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 GTF2H2CQ6P1K8 395 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 TEX261Q6UWH6 196 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 BHLHA9Q7RTU4 235 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 GOLGA7Q7Z5G4 137 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SLC44A2Q8IWA5 706 aaPredicted RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 LAX1Q8IWV1 398 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 C9orf62Q8N4C0 152 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 ZNF557Q8N988 423 aaPredicted RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 OR10Z1Q8NGY1 313 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 KCNC2Q96PR1 638 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SMOQ99835 787 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 MARVELD1Q9BSK0 173 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 CXCL16Q9H2A7 254 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PPA2Q9H2U2 334 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 RANBP3Q9H6Z4 567 aaPredicted RBP11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 SSR3Q9UNL2 185 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 RWDD3Q9Y3V2 267 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 KCTD3Q9Y597 815 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 PCDHGA2Q9Y5H1 932 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 U3KQ87 197 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 GBF1Q92538 1859 aa11.12□□□□□ -0.63
TNRC6A-205ENST00000464539 MYADML2A6NDP7 307 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 CCL22O00626 93 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 ADAMDEC1O15204 470 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 VTNP04004 478 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 IFI30P13284 250 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 MYOGP15173 224 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 PSMA3P25788 255 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 GPC1P35052 558 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 BRCC3P46736 316 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 ETV1P50549 477 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 CDC42EP1Q00587 391 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 PTGR1Q14914 329 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 VEPH1Q14D04 833 aa11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 PUS10Q3MIT2 529 aaKnown RBP11.11□□□□□ -0.63
TNRC6A-205ENST00000464539 IQCCQ4KMZ1 466 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms