RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 COL26A1Q96A83 441 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 SLC45A3Q96JT2 553 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 NTMT1Q9BV86 223 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 SEMA4BQ9NPR2 832 aaPredicted RBP18.84■□□□□ 0.61
COL9A3-204ENST00000463487 FARSAQ9Y285 508 aaKnown RBP18.84■□□□□ 0.61
COL9A3-204ENST00000463487 SSUH2Q9Y2M2 353 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 PCDHGA6Q9Y5G7 932 aa18.84■□□□□ 0.61
COL9A3-204ENST00000463487 A0A088AWK7 358 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 ZNF891A8MT65 544 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-204ENST00000463487 G3V2L1 256 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 H0YIG0 161 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 SPAG7O75391 227 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 ALBP02768 609 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 STATHP02808 62 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 PCNAP12004 261 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 H2AFXP16104 143 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-204ENST00000463487 ZNF10P21506 573 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-204ENST00000463487 PTPN4P29074 926 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 DNAJB13P59910 316 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 CLCQ05315 142 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 NCF4Q15080 339 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 MLIPQ5VWP3 458 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 MILR1Q7Z6M3 343 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 GOLGA6L1Q8N7Z2 621 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 L3MBTL4Q8NA19 623 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 ARMC2Q8NEN0 867 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 ZCCHC10Q8TBK6 192 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 MMABQ96EY8 250 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-204ENST00000463487 FAM111AQ96PZ2 611 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 TMEM237Q96Q45 408 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 CENPKQ9BS16 269 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 RHBGQ9H310 441 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 NXT1Q9UKK6 140 aaKnown RBP18.83■□□□□ 0.6
COL9A3-204ENST00000463487 FRYQ5TBA9 3013 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 ASPMQ8IZT6 3477 aa18.83■□□□□ 0.6
COL9A3-204ENST00000463487 H3BQF6 201 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 NSA2O95478 260 aaKnown RBP18.82■□□□□ 0.6
COL9A3-204ENST00000463487 ONECUT2O95948 504 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 CD22P20273 847 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 ITPKBP27987 946 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 OCA2Q04671 838 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 VAC14Q08AM6 782 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 DSG2Q14126 1118 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 LIPMQ5VYY2 423 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 TTC19Q6DKK2 380 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-204ENST00000463487 FAM198BQ6UWH4 519 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 LAS2Q8IYD9 372 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 METTL27Q8N6F8 245 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-204ENST00000463487 CCNYL1Q8N7R7 359 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 KCT2Q8NC54 265 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 TCP10LQ8TDR4 215 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 STARD8Q92502 1023 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 FAR2Q96K12 515 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 SLC6A16Q9GZN6 736 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 SYNPO2LQ9H987 977 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 ZNF282Q9UDV7 671 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-204ENST00000463487 TSC22D4Q9Y3Q8 395 aa18.82■□□□□ 0.6
COL9A3-204ENST00000463487 A0A0A6YYC8 382 aaPredicted RBP18.81■□□□□ 0.6
COL9A3-204ENST00000463487 H0YIV9 168 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 I3L1I5 382 aaPredicted RBP18.81■□□□□ 0.6
COL9A3-204ENST00000463487 OR7A17O14581 309 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 TM9SF1O15321 606 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 PRAMEF4O60810 478 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 RECKO95980 971 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 ATXN8OSP0DMR3 200 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 ALOX12P18054 663 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 ITGAXP20702 1163 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 PIK3CBP42338 1070 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 LCP2Q13094 533 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 SLC9A5Q14940 896 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 CPSF6Q16630 551 aaKnown RBP eCLIP18.81■□□□□ 0.6
COL9A3-204ENST00000463487 GGTA1PQ4G0N0 100 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 TOR1AIP1Q5JTV8 583 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 PRAMEF9Q5VWM5 478 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 TRIM40Q6P9F5 258 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 OVCH1Q7RTY7 1134 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 SYVN1Q86TM6 617 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 EXOC3L1Q86VI1 746 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 ENDOVQ8N8Q3 282 aaKnown RBP18.81■□□□□ 0.6
COL9A3-204ENST00000463487 SRFBP1Q8NEF9 429 aaKnown RBP18.81■□□□□ 0.6
COL9A3-204ENST00000463487 OR7G3Q8NG95 312 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 TRPC4APQ8TEL6 797 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 CREB3L4Q8TEY5 395 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 GAL3ST3Q96A11 431 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 NSUN5Q96P11 429 aaKnown RBP18.81■□□□□ 0.6
COL9A3-204ENST00000463487 MACROD1Q9BQ69 325 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 YIPF2Q9BWQ6 316 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 ACTL8Q9H568 366 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 WDR54Q9H977 334 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 AKIRIN1Q9H9L7 192 aaPredicted RBP18.81■□□□□ 0.6
COL9A3-204ENST00000463487 OXSMQ9NWU1 459 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 ZNF490Q9ULM2 529 aaPredicted RBP18.81■□□□□ 0.6
COL9A3-204ENST00000463487 MAU2Q9Y6X3 613 aa18.81■□□□□ 0.6
COL9A3-204ENST00000463487 K7ENP7 123 aa18.8■□□□□ 0.6
COL9A3-204ENST00000463487 TERTO14746 1132 aaKnown RBP18.8■□□□□ 0.6
COL9A3-204ENST00000463487 EFSO43281 561 aa18.8■□□□□ 0.6
COL9A3-204ENST00000463487 TYROBPO43914 113 aa18.8■□□□□ 0.6
COL9A3-204ENST00000463487 ZWINTO95229 277 aa18.8■□□□□ 0.6
COL9A3-204ENST00000463487 IL1RNP18510 177 aa18.8■□□□□ 0.6
COL9A3-204ENST00000463487 FOLR3P41439 243 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms