RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 MAGEB18Q96M61 343 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 TSNARE1Q96NA8 513 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 BIRC8Q96P09 236 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 SORCS2Q96PQ0 1159 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 OLFM1Q99784 485 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 GABRG3Q99928 467 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 SPATA16Q9BXB7 569 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 FAM83DQ9H4H8 585 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 CCDC134Q9H6E4 229 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 FOXJ2Q9P0K8 574 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 TMEM216Q9P0N5 145 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 CD84Q9UIB8 345 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 CRLS1Q9UJA2 301 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 RUVBL2Q9Y230 463 aaKnown RBP7.16□□□□□ -1.26
UBE4B-204ENST00000462658 ITM2BQ9Y287 266 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 DMRT1Q9Y5R6 373 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 ANKRD36A6QL64 1941 aa7.16□□□□□ -1.26
UBE4B-204ENST00000462658 KIAA1549LQ6ZVL6 1849 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 WDR91A4D1P6 747 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 SRRM3A6NNA2 597 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 AGAP14A8MT82 685 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 TCP11X1B4DZS4 312 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 PRMT5O14744 637 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 MID1O15344 667 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 PLIN3O60664 434 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 KLHL2O95198 593 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 RASAL1O95294 804 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 ANXA2P07355 339 aaKnown RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 VIMP08670 466 aaKnown RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 DHRS4L1P0CG22 281 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 NEFHP12036 1026 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 HOXB2P14652 356 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 TYRP1P17643 537 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 CD72P21854 359 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 RPS3P23396 243 aaKnown RBP eCLIP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 ACVR2AP27037 513 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 DRD3P35462 400 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 COPAP53621 1224 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 ADARP55265 1226 aaKnown RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 DCDC1P59894 354 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 RPS14P62263 151 aaKnown RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 IRX4P78413 519 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 TIAL1Q01085 375 aaKnown RBP eCLIP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 CCDC15Q0P6D6 951 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 ITGA9Q13797 1035 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 ZNF169Q14929 603 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 PDK4Q16654 411 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 CCDC153Q494R4 210 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 FBXO43Q4G163 708 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 ATP13A5Q4VNC0 1218 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 CTSL3PQ5NE16 218 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 FCRL6Q6DN72 434 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 CCDC91Q7Z6B0 441 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 TBC1D1Q86TI0 1168 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 DTX2Q86UW9 622 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 NRSN1Q8IZ57 195 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 RBFAQ8N0V3 343 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 SPATA6LQ8N4H0 392 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 HDDC3Q8N4P3 179 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 AADATQ8N5Z0 425 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 TRAM1L1Q8N609 369 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 RNF152Q8N8N0 203 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 DNAJB14Q8TBM8 379 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 DTX3LQ8TDB6 740 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 CXorf40AQ8TE69 158 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 KCTD4Q8WVF5 259 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 ZNF75CPQ92670 426 aaPredicted RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 RFKQ969G6 155 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 ULK4Q96C45 1275 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 NXNL1Q96CM4 212 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 CHMP6Q96FZ7 201 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 WRAP53Q9BUR4 548 aaKnown RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 RIOK2Q9BVS4 552 aaKnown RBP7.15□□□□□ -1.26
UBE4B-204ENST00000462658 C1QTNF1Q9BXJ1 281 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 CLPBQ9H078 707 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 ABCG8Q9H221 673 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 P2RY12Q9H244 342 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 NMRAL1Q9HBL8 299 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 POPDC3Q9HBV1 291 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 TAS2R13Q9NYV9 303 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 EMCNQ9ULC0 261 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 FADS3Q9Y5Q0 445 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 COMMD10Q9Y6G5 202 aa7.15□□□□□ -1.26
UBE4B-204ENST00000462658 MUC22E2RYF6 1773 aaPredicted RBP7.15□□□□□ -1.27
UBE4B-204ENST00000462658 TICRRQ7Z2Z1 1910 aa7.15□□□□□ -1.27
UBE4B-204ENST00000462658 A0A1W2PQF6 199 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 SHISA7A6NL88 538 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 E5RI56 91 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 H3BMM5 538 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 BIRC5O15392 142 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 NIPSNAP2O75323 286 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 VPS26AO75436 327 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 RNASEH2AO75792 299 aaKnown RBP7.14□□□□□ -1.27
UBE4B-204ENST00000462658 RECQL5O94762 991 aaPredicted RBP7.14□□□□□ -1.27
UBE4B-204ENST00000462658 WISP3O95389 354 aaPredicted RBP7.14□□□□□ -1.27
UBE4B-204ENST00000462658 DNTTP04053 509 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 APOA4P06727 396 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 PYGLP06737 847 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 BPGMP07738 259 aa7.14□□□□□ -1.27
UBE4B-204ENST00000462658 CCDC166P0CW27 439 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms