RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 ZNF385BQ569K4 471 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 ZNF805Q5CZA5 627 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 COX20Q5RI15 118 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 FAHD1Q6P587 224 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 TECPR1Q7Z6L1 1165 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 CFAP206Q8IYR0 622 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 C11orf65Q8NCR3 313 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 ZNF347Q96SE7 839 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 DOHHQ9BU89 302 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 RAD18Q9NS91 495 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 HCFC2Q9Y5Z7 792 aa16.3■□□□□ 0.2
ACTB-207ENST00000462494 CLDN25C9JDP6 229 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 SLC22A1O15245 554 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 SULT1C4O75897 302 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 TGFB1P01137 390 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 VIPP01282 170 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 SYN1P17600 705 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 ITGB8P26012 769 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 TBPL1P62380 186 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 ZNF846Q147U1 533 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 IQCCQ4KMZ1 466 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 LIPIQ6XZB0 460 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 SLCO4C1Q6ZQN7 724 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 DPPA4Q7L190 304 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 CPA6Q8N4T0 437 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 SVOPQ8N4V2 548 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 OR52J3Q8NH60 311 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 CHPT1Q8WUD6 406 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 ZNF480Q8WV37 535 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 COQ8BQ96D53 544 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 YIPF6Q96EC8 236 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 METTL2AQ96IZ6 378 aaKnown RBP16.29■□□□□ 0.2
ACTB-207ENST00000462494 EPYCQ99645 322 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 SPATA9Q9BWV2 254 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 ACOT13Q9NPJ3 140 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 ZNF282Q9UDV7 671 aaPredicted RBP16.29■□□□□ 0.2
ACTB-207ENST00000462494 SH2B3Q9UQQ2 575 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 PLXNA2O75051 1894 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 KPNA3O00505 521 aaPredicted RBP16.29■□□□□ 0.2
ACTB-207ENST00000462494 ZNF197O14709 1029 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 NADKO95544 446 aaPredicted RBP16.29■□□□□ 0.2
ACTB-207ENST00000462494 FUCA1P04066 466 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 PCGF2P35227 344 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 OR1E2P47887 323 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 CCR3P51677 355 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 HBA1P69905 142 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 MC1RQ01726 317 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 MEF2AQ02078 507 aaPredicted RBP16.29■□□□□ 0.2
ACTB-207ENST00000462494 FOXD4Q12950 439 aaPredicted RBP16.29■□□□□ 0.2
ACTB-207ENST00000462494 SLBPQ14493 270 aaKnown RBP eCLIP16.29■□□□□ 0.2
ACTB-207ENST00000462494 PROX2Q3B8N5 592 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 ARHGAP15Q53QZ3 475 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 SYT6Q5T7P8 510 aaPredicted RBP16.29■□□□□ 0.2
ACTB-207ENST00000462494 IER5LQ5T953 404 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 EGFLAMQ63HQ2 1017 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 ERAP2Q6P179 960 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 ADCK1Q86TW2 530 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 ENTHD1Q8IYW4 607 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 CIDECQ96AQ7 238 aaPredicted RBP16.29■□□□□ 0.2
ACTB-207ENST00000462494 VPS35Q96QK1 796 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 TCF25Q9BQ70 676 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 HMG20AQ9NP66 347 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 EXO1Q9UQ84 846 aaKnown RBP16.29■□□□□ 0.2
ACTB-207ENST00000462494 PCDHGB3Q9Y5G1 929 aa16.29■□□□□ 0.2
ACTB-207ENST00000462494 HELZP42694 1942 aaKnown RBP16.28■□□□□ 0.2
ACTB-207ENST00000462494 ZBBXA8MT70 800 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 HIDE1A8MVS5 230 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 TNFRSF11BO00300 401 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 RNASET2O00584 256 aaKnown RBP16.28■□□□□ 0.2
ACTB-207ENST00000462494 WBP4O75554 376 aaKnown RBP16.28■□□□□ 0.2
ACTB-207ENST00000462494 GCM2O75603 506 aaPredicted RBP16.28■□□□□ 0.2
ACTB-207ENST00000462494 C1orf105O95561 183 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 C6orf47O95873 294 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 MMP12P39900 470 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 RAB15P59190 212 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 NCS1P62166 190 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 CYP27C1Q4G0S4 372 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 TMEM236Q5W0B7 351 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 CAMKMTQ7Z624 323 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 TRAPPC5Q8IUR0 188 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 P3H2Q8IVL5 708 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 SLC35A5Q9BS91 424 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 OR51B5Q9H339 312 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 CCNB1IP1Q9NPC3 277 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 NECTIN3Q9NQS3 549 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 TMEM184CQ9NVA4 438 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 ACSL6Q9UKU0 697 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 PCDHGA6Q9Y5G7 932 aa16.28■□□□□ 0.2
ACTB-207ENST00000462494 FUOMA2VDF0 154 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 TMEM229AB2RXF0 380 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 MOSPD3O75425 235 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 LCKP06239 509 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 ZNF8P17098 575 aaPredicted RBP16.27■□□□□ 0.2
ACTB-207ENST00000462494 ACVR2AP27037 513 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 SELENOWP63302 87 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 ZNF763Q0D2J5 394 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 TEAD4Q15561 434 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 DGUOKQ16854 277 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 PLPP4Q5VZY2 271 aa16.27■□□□□ 0.2
ACTB-207ENST00000462494 PRSS48Q7RTY5 328 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms