RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 C19orf25Q9UFG5 118 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-207ENST00000461798 ERRFI1Q9UJM3 462 aaPredicted RBP8.65□□□□□ -1.02
BRCA1-207ENST00000461798 IKZF3Q9UKT9 509 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 SLC5A6Q9Y289 635 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 PSAT1Q9Y617 370 aa8.65□□□□□ -1.02
BRCA1-207ENST00000461798 NUP210LQ5VU65 1888 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 DYTNA2CJ06 578 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 EFCAB8A8MWE9 144 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 SGK494L7N484 410 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 CDK2AP1O14519 115 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 FANCGO15287 622 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 OR1F1O43749 312 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 GALR3O60755 368 aaPredicted RBP8.64□□□□□ -1.03
BRCA1-207ENST00000461798 STATHP02808 62 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 SLC35G6P0C7Q6 338 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 SMIM10L1P0DMW3 83 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 ITGAMP11215 1152 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 ALOX12P18054 663 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 IL1RNP18510 177 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 RPL21P46778 160 aaKnown RBP8.64□□□□□ -1.03
BRCA1-207ENST00000461798 SCTRP47872 440 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 AGTR2P50052 363 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 HNMTP50135 292 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 TAS2R39P59534 338 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 ARG2P78540 354 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 RHAGQ02094 409 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 CDC16Q13042 620 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 PDIA2Q13087 525 aaKnown RBP8.64□□□□□ -1.03
BRCA1-207ENST00000461798 ELOAQ14241 798 aaKnown RBP8.64□□□□□ -1.03
BRCA1-207ENST00000461798 CSHL1Q14406 222 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 INAQ16352 499 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 CATSPEREQ5SY80 951 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 FAAH2Q6GMR7 532 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 ANKRD37Q7Z713 158 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 KLHDC8AQ8IYD2 350 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 SHISA5Q8N114 240 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 TBC1D19Q8N5T2 526 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 BCORP1Q8N888 145 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 FBXO36Q8NEA4 188 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 SLC5A11Q8WWX8 675 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 NEIL2Q969S2 332 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 ALKBH8Q96BT7 664 aaKnown RBP8.64□□□□□ -1.03
BRCA1-207ENST00000461798 PYCR2Q96C36 320 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 SMIM10Q96HG1 83 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 CNDP1Q96KN2 507 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 OR1F2PQ96R84 312 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 ERP44Q9BS26 406 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 RHOJQ9H4E5 214 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 PELI2Q9HAT8 420 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 POPDC3Q9HBV1 291 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 LANCL2Q9NS86 450 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 PLA2G3Q9NZ20 509 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 STMN3Q9NZ72 180 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 HCN3Q9P1Z3 774 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 WHRNQ9P202 907 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 ZFP69BQ9UJL9 534 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 SNX24Q9Y343 169 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 NAALAD2Q9Y3Q0 740 aa8.64□□□□□ -1.03
BRCA1-207ENST00000461798 MDC1Q14676 2089 aaKnown RBP8.64□□□□□ -1.03
BRCA1-207ENST00000461798 FAM95CA0A1B0GW59 222 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 PABPN1LA6NDY0 278 aaKnown RBP8.63□□□□□ -1.03
BRCA1-207ENST00000461798 MAGEB17A8MXT2 336 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 C3orf80F5H4A9 247 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 CDC7O00311 574 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 EIF3HO15372 352 aaKnown RBP eCLIP8.63□□□□□ -1.03
BRCA1-207ENST00000461798 WISP3O95389 354 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-207ENST00000461798 GUCA1CO95843 209 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 WDPCPO95876 746 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 CELA2AP08217 269 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 MYBL2P10244 700 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 SKP1P63208 163 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 REEP5Q00765 189 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 MEF2AQ02078 507 aaPredicted RBP8.63□□□□□ -1.03
BRCA1-207ENST00000461798 FASTKD3Q14CZ7 662 aaKnown RBP8.63□□□□□ -1.03
BRCA1-207ENST00000461798 MINDY4Q4G0A6 757 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 C4orf17Q53FE4 359 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 CDKL4Q5MAI5 379 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 ABHD17BQ5VST6 288 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 NXPE4Q6UWF7 544 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 LANCL3Q6ZV70 420 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 THOC6Q86W42 341 aaKnown RBP8.63□□□□□ -1.03
BRCA1-207ENST00000461798 ANKMY2Q8IV38 441 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 SIRT6Q8N6T7 355 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 ZNF740Q8NDX6 193 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 TRPV3Q8NET8 790 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 DNAJB8Q8NHS0 232 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 ZCCHC10Q8TBK6 192 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 M1APQ8TC57 530 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 TBC1D20Q96BZ9 403 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 MOCOSQ96EN8 888 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 VPS39Q96JC1 886 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 ZNF354BQ96LW1 612 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 C5orf34Q96MH7 638 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 TAAR6Q96RI8 345 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 KRT12Q99456 494 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 TRIM31Q9BZY9 425 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 SLC6A16Q9GZN6 736 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 SPNS1Q9H2V7 528 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 MMP25Q9NPA2 562 aa8.63□□□□□ -1.03
BRCA1-207ENST00000461798 SMYD2Q9NRG4 433 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms