RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 SEMA3GQ9NS98 782 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 C14orf105Q9NVL8 296 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 TBK1Q9UHD2 729 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 MRPS2Q9Y399 296 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 MAP4K5Q9Y4K4 846 aa10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 TNPO3Q9Y5L0 923 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-213ENST00000461577 NBEAQ8NFP9 2946 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 SMIM23A6NLE4 172 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 SGK494L7N484 410 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 KLHL18O94889 574 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 SHBGP04278 402 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 PRB1P04280 392 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 HEXBP07686 556 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 EPB42P16452 691 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 ALOX12P18054 663 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 MMP11P24347 488 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 GSTM2P28161 218 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 HNF4AP41235 474 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 PIK3CGP48736 1102 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 CCL11P51671 97 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 EMP2P54851 167 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 STXBP1P61764 594 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 MAT1AQ00266 395 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 KLC1Q07866 573 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 CHAF1BQ13112 559 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 DOC2AQ14183 400 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 TBCCQ15814 346 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 SYT16Q17RD7 645 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 VWA2Q5GFL6 755 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 TOR1AIP1Q5JTV8 583 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 MFSD4BQ5TF39 518 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 CPZQ66K79 652 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 NIPAL1Q6NVV3 410 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 PRSS41Q7RTY9 318 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 PPP1R32Q7Z5V6 425 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 MRGPREQ86SM8 312 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 PTGR2Q8N8N7 351 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 TMEM102Q8N9M5 508 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 ANKRD53Q8N9V6 530 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 UBE2E3Q969T4 207 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 PHF21BQ96EK2 531 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 MRPL57Q9BQC6 102 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 EFCAB11Q9BUY7 163 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 SEMA4CQ9C0C4 833 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 ING2Q9H160 280 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 MRPL46Q9H2W6 279 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 PPCSQ9HAB8 311 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 HCN3Q9P1Z3 774 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 XPR1Q9UBH6 696 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 TUBD1Q9UJT1 453 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 C3orf18Q9UK00 162 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 G3BP2Q9UN86 482 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 NAALAD2Q9Y3Q0 740 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 ASB1Q9Y576 335 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 SLC22A7Q9Y694 548 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 MGAQ8IWI9 3026 aa10.04□□□□□ -0.8
TRAPPC12-213ENST00000461577 LOC400499M0QZD8 3231 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 IGLV3-12A0A075B6K2 115 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 LRRC14BA6NHZ5 514 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 GOLGA8RI6L899 631 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 KLK8O60259 260 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 RDH16O75452 317 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 SERPINA6P08185 405 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 ZNF888P0CJ79 500 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 PCNAP12004 261 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 KRT15P19012 456 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 TAC1P20366 129 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 EEF1DP29692 281 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 HPDP32754 393 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 HSD17B3P37058 310 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 SLCO1A2P46721 670 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 RAB8AP61006 207 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 GTF2H2Q13888 395 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 NAA30Q147X3 362 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 PCBP2Q15366 365 aaKnown RBP eCLIP10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 ERCC6LQ2NKX8 1250 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 NUP210LQ5VU65 1888 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 GTF2H2CQ6P1K8 395 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 WDR93Q6P2C0 686 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 EMBQ6PCB8 327 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 LCA5Q86VQ0 697 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 TMEM151BQ8IW70 566 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 AFAP1L2Q8N4X5 818 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 AMER3Q8N944 861 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 OR51Q1Q8NH59 317 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 C9orf43Q8TAL5 461 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 ACMSDQ8TDX5 336 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 UTP15Q8TED0 518 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 CREB3L4Q8TEY5 395 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 NACC2Q96BF6 587 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 WDR34Q96EX3 536 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 SEC16BQ96JE7 1060 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 TRIM55Q9BYV6 548 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 TGIF2Q9GZN2 237 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 SLC6A16Q9GZN6 736 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 SLC25A18Q9H1K4 315 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 KLHL31Q9H511 634 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 P4HTMQ9NXG6 502 aa10.03□□□□□ -0.8
TRAPPC12-213ENST00000461577 COPG2Q9UBF2 871 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms