RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 RHCGQ9UBD6 479 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 CRNNQ9UBG3 495 aaPredicted RBP3.15□□□□□ -1.91
VPS8-215ENST00000460158 KCNG2Q9UJ96 466 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 TEX264Q9Y6I9 313 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 COMMD3-BMI1R4GMX3 469 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 U3KQV3 271 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 SCN5AQ14524 2016 aa3.15□□□□□ -1.91
VPS8-215ENST00000460158 GREB1LQ9C091 1923 aaPredicted RBP3.15□□□□□ -1.91
VPS8-215ENST00000460158 TRBV2A0A0J9YWF9 115 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 PRSS51A0A1B0GVH4 220 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 CFAP73A6NFT4 308 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 C15orf62A8K5M9 175 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 HEPACAM2A8MVW5 462 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 PRSS44E7EML9 344 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 GOLGA8SH3BPF8 625 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 CCDC188H7C350 402 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 DVL1O14640 695 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 SYNGR3O43761 229 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 SSX4O60224 188 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 CTSVO60911 334 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 BAG4O95429 457 aaKnown RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 IGHV4-39P01824 125 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 KRT14P02533 472 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 FGF4P08620 206 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 FAM58BPP0C7Q3 252 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 STAG3L3P0CL85 134 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 ZNF23P17027 643 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 GJA1P17302 382 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 NR1D1P20393 614 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 DNASE1P24855 282 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 NF2P35240 595 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 OR1G1P47890 313 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 KCNJ1P48048 391 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 DVL1P1P54792 670 aaPredicted RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 MTTPP55157 894 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 MLLT10P55197 1068 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 CDH13P55290 713 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 ATP5IP56385 69 aaPredicted RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 SARNPP82979 210 aaKnown RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 MBTD1Q05BQ5 628 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 PLA2G7Q13093 441 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 PPIGQ13427 754 aaKnown RBP eCLIP3.14□□□□□ -1.913e-8■□□□□ 10.6
VPS8-215ENST00000460158 GIT2Q14161 759 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 CEBPEQ15744 281 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 IFI44LQ53G44 452 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 KLHL26Q53HC5 615 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 TAF1BQ53T94 588 aaPredicted RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 PDSS1Q5T2R2 415 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 NDUFAF5Q5TEU4 345 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 OR6B2Q6IFH4 312 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 CORO6Q6QEF8 472 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 FIGLAQ6QHK4 219 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 C11orf57Q6ZUT1 292 aaPredicted RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 DGLUCYQ7Z3D6 616 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 TMCO2Q7Z6W1 182 aaPredicted RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 SMIM29Q86T20 159 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 COMTD1Q86VU5 262 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 LONP2Q86WA8 852 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 NR2C2APQ86WQ0 139 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 SLC22A9Q8IVM8 553 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 CCDC83Q8IWF9 413 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 ARFGAP2Q8N6H7 521 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 SLC24A4Q8NFF2 622 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 DMBX1Q8NFW5 382 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 EXOC6Q8TAG9 804 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 DNASE1L2Q92874 299 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 PEX13Q92968 403 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 EXT2Q93063 718 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 CCDC51Q96ER9 411 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 LINC00615Q96LM1 132 aaPredicted RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 ZNF560Q96MR9 790 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 OR6C1Q96RD1 312 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 OLFM1Q99784 485 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 OSBPL8Q9BZF1 889 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 FAM192AQ9GZU8 254 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 LSG1Q9H089 658 aaKnown RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 TMEM117Q9H0C3 514 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 GOLPH3LQ9H4A5 285 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 RMND5AQ9H871 391 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 PARVGQ9HBI0 331 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 GPN1Q9HCN4 374 aaPredicted RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 HHATLQ9HCP6 504 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 FARSBQ9NSD9 589 aaKnown RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 ZFP57Q9NU63 452 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 AGPAT5Q9NUQ2 364 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 HAO2Q9NYQ3 351 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 IL20Q9NYY1 176 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 GDE1Q9NZC3 331 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 SPG21Q9NZD8 308 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 TAAR2Q9P1P5 351 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 BARX2Q9UMQ3 279 aaPredicted RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 FAF1Q9UNN5 650 aaPredicted RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 MRPS7Q9Y2R9 242 aaKnown RBP3.14□□□□□ -1.91
VPS8-215ENST00000460158 GMEB1Q9Y692 573 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 ZNF541Q9H0D2 1346 aa3.14□□□□□ -1.91
VPS8-215ENST00000460158 IGLV5-45A0A087WSX0 123 aa3.13□□□□□ -1.91
VPS8-215ENST00000460158 A0A087WZY1 265 aa3.13□□□□□ -1.91
VPS8-215ENST00000460158 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.13□□□□□ -1.91
VPS8-215ENST00000460158 SERTM2A0A1B0GWG4 89 aa3.13□□□□□ -1.91
VPS8-215ENST00000460158 FAM230AA0A1W2PPH8 454 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms