RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 HMGB4Q8WW32 186 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 HMCESQ96FZ2 354 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 DMRTB1Q96MA1 342 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 RBP7Q96R05 134 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 PCDHB18PQ96TA0 734 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 HSD17B14Q9BPX1 270 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 CNTN3Q9P232 1028 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 TMEM150BA6NC51 233 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 RBMXP38159 391 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 TNFSF9P41273 254 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 MAGEA6P43360 314 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 AFF1P51825 1210 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 EEFSECP57772 596 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 OR12D2P58182 307 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 GRK1Q15835 563 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ZNF550Q7Z398 422 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 LRRC57Q8N9N7 239 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 LNX1Q8TBB1 728 aaPredicted RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 FANK1Q8TC84 345 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ZDHHC12Q96GR4 267 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 USB1Q9BQ65 265 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 UQCC2Q9BRT2 126 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 STRA6Q9BX79 667 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ACTR3BQ9P1U1 418 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 HES2Q9Y543 173 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ZNF536O15090 1300 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 A0A1W2PRB8 838 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 IRF6O14896 467 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 KLRC4O43908 158 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 DNAJB6O75190 326 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 HNRNPDQ14103 355 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 ISLR2Q6UXK2 745 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 OR10A6Q8NH74 314 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 TXN2Q99757 166 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 POLR2J2Q9GZM3 115 aaKnown RBP8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 BTBD1Q9H0C5 482 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 TM9SF3Q9HD45 589 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 TREM1Q9NP99 234 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 SNTG1Q9NSN8 517 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 NDUFAF4Q9P032 175 aa8.64□□□□□ -1.03
SHROOM4-203ENST00000460112 NPIPA2E9PIF3 369 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 NPIPA3F8WFD2 350 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 PHYHO14832 338 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 C2P06681 752 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 DLSTP36957 453 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 DPP6P42658 865 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 GRIK5Q16478 980 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 SDHAF4Q5VUM1 108 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 AADACL4Q5VUY2 407 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 MON1BQ7L1V2 547 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 C12orf29Q8N999 325 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 NANOS1Q8WY41 292 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 ZDHHC3Q9NYG2 299 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 TVP23BQ9NYZ1 205 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 VPS29Q9UBQ0 182 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 CNOT11Q9UKZ1 510 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 SPTBN2O15020 2390 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 C2orf71A6NGG8 1288 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 K7EPI3 171 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 CDK2P24941 298 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 ICAM3P32942 547 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 CMC1Q7Z7K0 106 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 C17orf62Q9BQA9 187 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 FAM83CQ9BQN1 747 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 DNTTIP1Q9H147 329 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 MS4A12Q9NXJ0 267 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 CD84Q9UIB8 345 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 GNG8Q9UK08 70 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 UTS2RQ9UKP6 389 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 hCG_2039718K7EN88 272 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 FFAR2O15552 330 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 S1PR1P21453 382 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 YAP1P46937 504 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 PLA2G16P53816 162 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 MAB21L1Q13394 359 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 ILDR1Q86SU0 546 aaPredicted RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 ENDOVQ8N8Q3 282 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 OR10G2Q8NGC3 310 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 HSPA12BQ96MM6 686 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 TMEM175Q9BSA9 504 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 C12orf65Q9H3J6 166 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 MRM3Q9HC36 420 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 EXOSC1Q9Y3B2 195 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 SMIM28A0A1B0GU29 152 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 MT-CO2P00403 227 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 OAS1P00973 400 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 RPS3AP61247 264 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 TLE2Q04725 743 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 ZNF181Q2M3W8 571 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 COQ5Q5HYK3 327 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 CIR1Q86X95 450 aaPredicted RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 OR5T2Q8NGG2 359 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 SDCBP2Q9H190 292 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 BRF2Q9HAW0 419 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 KCNS2Q9ULS6 477 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 MAFFQ9ULX9 164 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 MRPL42Q9Y6G3 142 aaKnown RBP8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 LRRN3E7EW58 273 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 UGT1A9O60656 530 aa8.63□□□□□ -1.03
SHROOM4-203ENST00000460112 UGT1A6P19224 532 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms