RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 PSMB9P28065 219 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 KRT6CP48668 564 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 IST1P53990 364 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 TEKQ02763 1124 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 SLC10A7Q0GE19 358 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 PCBP2Q15366 365 aaKnown RBP eCLIP15.21■□□□□ 0.02
CMTM3-203ENST00000460097 CST6Q15828 149 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 AGAP6Q5VW22 663 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 CPZQ66K79 652 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 LDB1Q86U70 411 aaPredicted RBP15.21■□□□□ 0.02
CMTM3-203ENST00000460097 TMIEQ8NEW7 156 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 FBXO30Q8TB52 745 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 CNIH3Q8TBE1 160 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 RLN3Q8WXF3 142 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 PYURFQ96I23 114 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 AGAP4Q96P64 663 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 NDEL1Q9GZM8 345 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.21■□□□□ 0.024e-6■■□□□ 12.2
CMTM3-203ENST00000460097 VAPAQ9P0L0 249 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 IL36AQ9UHA7 158 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 MED16Q9Y2X0 877 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 GRIP1Q9Y3R0 1128 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 TNPO3Q9Y5L0 923 aaKnown RBP15.21■□□□□ 0.02
CMTM3-203ENST00000460097 COMMD10Q9Y6G5 202 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 ANKRD36A6QL64 1941 aa15.21■□□□□ 0.02
CMTM3-203ENST00000460097 CACNA1HO95180 2353 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 C1QTNF3-AMACRE9PGA6 284 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 PSMD11O00231 422 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 MID1O15344 667 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 LILRB5O75023 590 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 SEC22BO75396 215 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 CREG1O75629 220 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 RHOBTB1O94844 696 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 IGSF6O95976 241 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 ADH1BP00325 375 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 PRNPP04156 253 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 SERPINF2P08697 491 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 CD36P16671 472 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 C5AR1P21730 350 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 P2RY2P41231 377 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 TPMTP51580 245 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 MAD2L1BPQ15013 274 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-203ENST00000460097 TSNQ15631 228 aaKnown RBP15.2■□□□□ 0.02
CMTM3-203ENST00000460097 RBBP7Q16576 425 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 ARSIQ5FYB1 569 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 C6orf183Q5T699 404 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 ATXN7L2Q5T6C5 722 aaPredicted RBP15.2■□□□□ 0.02
CMTM3-203ENST00000460097 ZNF544Q6NX49 715 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 PAQR3Q6TCH7 311 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 TMEM179BQ7Z7N9 219 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 SPACA7Q96KW9 195 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 PSKH2Q96QS6 385 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 CCDC32Q9BV29 185 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 NT5MQ9NPB1 228 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 PLCXD1Q9NUJ7 323 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 NUDT4Q9NZJ9 180 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 USP36Q9P275 1121 aaKnown RBP15.2■□□□□ 0.02
CMTM3-203ENST00000460097 LHX3Q9UBR4 397 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 RAPGEFL1Q9UHV5 662 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 INVSQ9Y283 1065 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 RBMX2Q9Y388 322 aaKnown RBP15.2■□□□□ 0.02
CMTM3-203ENST00000460097 PEX16Q9Y5Y5 336 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 R4GN57 208 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 VPS13AQ96RL7 3174 aa15.2■□□□□ 0.02
CMTM3-203ENST00000460097 LOC110117498-PIK3R3F6TDL0 507 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 MUSKO15146 869 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 RAD51BO15315 384 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 DFNA5O60443 496 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 ERN1O75460 977 aaKnown RBP15.19■□□□□ 0.02
CMTM3-203ENST00000460097 CTSLP07711 333 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 G6PDP11413 515 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 PRDX3P30048 256 aaKnown RBP15.19■□□□□ 0.02
CMTM3-203ENST00000460097 RCVRNP35243 200 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 MAP2K4P45985 399 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 ARHGDIAP52565 204 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 SLC13A2Q13183 592 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 SRSF5Q13243 272 aaKnown RBP15.19■□□□□ 0.02
CMTM3-203ENST00000460097 GBX1Q14549 363 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 SEMA3AQ14563 771 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 ZNF235Q14590 738 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 TBCEQ15813 527 aaPredicted RBP15.19■□□□□ 0.02
CMTM3-203ENST00000460097 SNX20Q7Z614 316 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 SIMC1Q8NDZ2 872 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 IL17RDQ8NFM7 739 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 KBTBD8Q8NFY9 601 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 OR6K2Q8NGY2 324 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 SETD6Q8TBK2 473 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 GANCQ8TET4 914 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 CAPSLQ8WWF8 208 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 PIK3R3Q92569 461 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 LRIG1Q96JA1 1093 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 EXOC2Q96KP1 924 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 PIF1Q9H611 641 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 ABCB10Q9NRK6 738 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 FBXL12Q9NXK8 326 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 CYP8B1Q9UNU6 501 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 NCKAP1Q9Y2A7 1128 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 PKP3Q9Y446 797 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 DMDP11532 3685 aa15.19■□□□□ 0.02
CMTM3-203ENST00000460097 KMOO15229 486 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms