RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 IL1RL2Q9HB29 575 aa23.35■■□□□ 1.33
U2AF1-204ENST00000459639 MYNNQ9NPC7 610 aa23.35■■□□□ 1.33
U2AF1-204ENST00000459639 TMEM74BQ9NUR3 256 aa23.35■■□□□ 1.33
U2AF1-204ENST00000459639 ADA2Q9NZK5 511 aa23.35■■□□□ 1.33
U2AF1-204ENST00000459639 TMEM181Q9P2C4 612 aa23.35■■□□□ 1.33
U2AF1-204ENST00000459639 SCAMP2O15127 329 aaKnown RBP23.34■■□□□ 1.33
U2AF1-204ENST00000459639 PPM1DO15297 605 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 HRO43593 1189 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 HOXB3P14651 431 aaPredicted RBP23.34■■□□□ 1.33
U2AF1-204ENST00000459639 MAGP20916 626 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 HPCAL1P37235 193 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 RXRGP48443 463 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 RELAQ04206 551 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 CEACAM7Q14002 265 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 KPNB1Q14974 876 aaKnown RBP23.34■■□□□ 1.33
U2AF1-204ENST00000459639 C1orf146Q5VVC0 180 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 ARMC6Q6NXE6 501 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 KLHL35Q6PF15 583 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 EFCAB3Q8N7B9 438 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 CDC26Q8NHZ8 85 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 PUM2Q8TB72 1066 aaKnown RBP eCLIP23.34■■□□□ 1.33
U2AF1-204ENST00000459639 ZUFSPQ96AP4 578 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 RGMAQ96B86 450 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 ZC3H10Q96K80 434 aaKnown RBP23.34■■□□□ 1.33
U2AF1-204ENST00000459639 QRFPRQ96P65 431 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 ELF4Q99607 663 aaPredicted RBP23.34■■□□□ 1.33
U2AF1-204ENST00000459639 ZNF717Q9BY31 904 aaPredicted RBP23.34■■□□□ 1.33
U2AF1-204ENST00000459639 ABCD2Q9UBJ2 740 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 ADAM29Q9UKF5 820 aa23.34■■□□□ 1.33
U2AF1-204ENST00000459639 CACNA1EQ15878 2313 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 CROCCQ5TZA2 2017 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 C15orf38-AP3S2A0A0A6YYH1 394 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 A0A0J9YY10 115 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 AKAP10O43572 662 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 CNR2P34972 360 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 ARRB1P49407 418 aaPredicted RBP23.33■■□□□ 1.33
U2AF1-204ENST00000459639 ARFIP1P53367 373 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 BNC1Q01954 994 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 PWP1Q13610 501 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 UGT8Q16880 541 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 HKDC1Q2TB90 917 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 ADPRMQ3LIE5 342 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 C14orf28Q4W4Y0 310 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 SAMD4BQ5PRF9 694 aaKnown RBP23.33■■□□□ 1.33
U2AF1-204ENST00000459639 CAMKMTQ7Z624 323 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 ARPINQ7Z6K5 226 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 DNAJB8Q8NHS0 232 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 GFM2Q969S9 779 aaKnown RBP23.33■■□□□ 1.33
U2AF1-204ENST00000459639 RMND5AQ9H871 391 aa23.33■■□□□ 1.33
U2AF1-204ENST00000459639 LRIT2A6NDA9 550 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 TRIM38O00635 465 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 KCNH1O95259 989 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 SERPIND1P05546 499 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 KLK1P06870 262 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 COX7A2P14406 83 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 ME2P23368 584 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 SLC6A2P23975 617 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 TPP2P29144 1249 aaPredicted RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 HNRNPH1P31943 449 aaKnown RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 BSGP35613 385 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 KIR3DL1P43629 444 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 SLC7A2P52569 658 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 BIRC2Q13490 618 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 CAPRIN1Q14444 709 aaKnown RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 PEAR1Q5VY43 1037 aaPredicted RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 FIGLAQ6QHK4 219 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 DLEU7Q6UYE1 221 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 RIPOR1Q6ZS17 1223 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 IKBIPQ70UQ0 350 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 GPR180Q86V85 440 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 NUDT13Q86X67 352 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 OR8J2Q8NGG1 315 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 C16orf78Q8WTQ4 265 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 RSC1A1Q92681 617 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 GTF2H4Q92759 462 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 CCDC124Q96CT7 223 aaKnown RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 REXO4Q9GZR2 422 aaKnown RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 POMT2Q9UKY4 750 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 POMPQ9Y244 141 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 MAN2B2Q9Y2E5 1009 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 NCOR1O75376 2440 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 CAPN5O15484 640 aaPredicted RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 SORBS2O94875 1100 aaKnown RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 UBXN7O94888 489 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 ATP6V1G2O95670 118 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 RPL3P39023 403 aaKnown RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 ACTR3P61158 418 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 CYP4F3Q08477 520 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 PGS1Q32NB8 556 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 C6orf132Q5T0Z8 1188 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 FCRL6Q6DN72 434 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 THAP11Q96EK4 314 aa23.32■■□□□ 1.32
U2AF1-204ENST00000459639 WBP11Q9Y2W2 641 aaKnown RBP23.32■■□□□ 1.32
U2AF1-204ENST00000459639 KLHL18O94889 574 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 GBAP04062 536 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 GSTM5P46439 218 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 PHC1P78364 1004 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 HYAL2Q12891 473 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 SPATS1Q496A3 300 aa23.31■■□□□ 1.32
U2AF1-204ENST00000459639 CCNYL2Q5T2Q4 361 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms