RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 AMIGO1Q86WK6 493 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 DEFB107AQ8IZN7 70 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 DSELQ8IZU8 1212 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 LIX1Q8N485 282 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 HPS1Q92902 700 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 MTFMTQ96DP5 389 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 HBEGFQ99075 208 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 THTPAQ9BU02 230 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 MENTQ9BUN1 341 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 MIR1-1HGQ9H1L0 117 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 SRMSQ9H3Y6 488 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 WDR41Q9HAD4 459 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 MRPS30Q9NP92 439 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 FARSBQ9NSD9 589 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 TMEM74BQ9NUR3 256 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 EVA1BQ9NVM1 165 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 GEMIN8Q9NWZ8 242 aaKnown RBP8.59□□□□□ -1.03
VPS50-207ENST00000458530 TAAR2Q9P1P5 351 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 ANKMY1Q9P2S6 941 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 GIMAP2Q9UG22 337 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 SUSD2Q9UGT4 822 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 ICKQ9UPZ9 632 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 PLEKHM1Q9Y4G2 1056 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 ENTPD2Q9Y5L3 495 aa8.59□□□□□ -1.03
VPS50-207ENST00000458530 TENM4Q6N022 2769 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 URB1O60287 2271 aaKnown RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 A0A1W2PP18 115 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 A0A1W2PR77 199 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 TRBC2A0A5B9 178 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 A6NCN8 305 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 ISM1B1AKI9 464 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 PRAMEF4O60810 478 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 EEDO75530 441 aaKnown RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 SEMA3DO95025 777 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 CSF2P04141 144 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 G6PDP11413 515 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 CD59P13987 128 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 GNSP15586 552 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 AMD1P17707 334 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 ENGP17813 658 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 CD22P20273 847 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 ITGAXP20702 1163 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 PRPS1L1P21108 318 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 PTX3P26022 381 aaPredicted RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 VARSP26640 1264 aaKnown RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 CPOXP36551 454 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 HPCAL1P37235 193 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 GSTM5P46439 218 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 AFF3P51826 1226 aaKnown RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 ELF3P78545 371 aaPredicted RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 SLC25A3Q00325 362 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 BIRC2Q13490 618 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 RIPK1Q13546 671 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 RBBP5Q15291 538 aaKnown RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 RFTN2Q52LD8 501 aaPredicted RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 TRIM61Q5EBN2 209 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 PRRT3Q5FWE3 981 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 CATSPEREQ5SY80 951 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 PRAMEF9Q5VWM5 478 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 CYB5D1Q6P9G0 228 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 KLHL35Q6PF15 583 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 IYDQ6PHW0 289 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 C19orf48Q6RUI8 117 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 MSANTD1Q6ZTZ1 278 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 PAGE2Q7Z2X7 111 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 NET1Q7Z628 596 aaPredicted RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 ADCK2Q7Z695 626 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 FAM129CQ86XR2 697 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 SYT12Q8IV01 421 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 ULK2Q8IYT8 1036 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 HUS1BQ8NHY5 278 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 ADAMTS14Q8WXS8 1223 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 DNASE2BQ8WZ79 361 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 JADE3Q92613 823 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 STMN2Q93045 179 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 FCRL1Q96LA6 429 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 QRFPRQ96P65 431 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 MTERF1Q99551 399 aaKnown RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 PRPF18Q99633 342 aaKnown RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 HOPXQ9BPY8 73 aaPredicted RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 ORAI3Q9BRQ5 295 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 ACAT2Q9BWD1 397 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 RHBGQ9H310 441 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 RMND5AQ9H871 391 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 TM9SF3Q9HD45 589 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 SPAG4Q9NPE6 437 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 DMRT3Q9NQL9 472 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 TMEM184CQ9NVA4 438 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 SIRT5Q9NXA8 310 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 GMPR2Q9P2T1 348 aaKnown RBP8.58□□□□□ -1.04
VPS50-207ENST00000458530 CPNE7Q9UBL6 633 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 CROTQ9UKG9 612 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 PILRBQ9UKJ0 227 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 SNX7Q9UNH6 387 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 AP3M1Q9Y2T2 418 aa8.58□□□□□ -1.04
VPS50-207ENST00000458530 SPTA1P02549 2419 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 A0A1W2PPV9 198 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 MAGEB17A8MXT2 336 aa8.57□□□□□ -1.04
VPS50-207ENST00000458530 C2orf74A8MZ97 194 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms