RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 KELP23276 732 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 DNAJA1P31689 397 aaKnown RBP16.02■□□□□ 0.15
CCDC43-202ENST00000457422 RYKP34925 604 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 PCGF2P35227 344 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 ARHGDIAP52565 204 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 ISL1P61371 349 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 VLDLRP98155 873 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 TOP3AQ13472 1001 aaPredicted RBP16.02■□□□□ 0.15
CCDC43-202ENST00000457422 SKIV2LQ15477 1246 aaKnown RBP16.02■□□□□ 0.15
CCDC43-202ENST00000457422 PRAMEF14Q5SWL7 426 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 C6orf141Q5SZD1 244 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 PRAMEF13Q5VWM6 474 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 CHST15Q7LFX5 561 aaPredicted RBP16.02■□□□□ 0.15
CCDC43-202ENST00000457422 OR4A15Q8NGL6 344 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 FBLIM1Q8WUP2 373 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 C12orf43Q96C57 262 aaKnown RBP16.02■□□□□ 0.15
CCDC43-202ENST00000457422 ASPSCR1Q9BZE9 553 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 SH3BP4Q9P0V3 963 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 EBF1Q9UH73 591 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 CDC14AQ9UNH5 594 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 CDH23Q9H251 3354 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 C5orf42Q9H799 3197 aa16.02■□□□□ 0.15
CCDC43-202ENST00000457422 SAP18O00422 153 aaKnown RBP16.01■□□□□ 0.15
CCDC43-202ENST00000457422 B4GAT1O43505 415 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 GBAP04062 536 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 FURINP09958 794 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 NUDT7P0C024 238 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 FPR1P21462 350 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 CALRP27797 417 aaKnown RBP16.01■□□□□ 0.15
CCDC43-202ENST00000457422 RPS6KA3P51812 740 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 TPD52P55327 224 aaPredicted RBP16.01■□□□□ 0.15
CCDC43-202ENST00000457422 ITGA1P56199 1179 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 PHEXP78562 749 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 CD47Q08722 323 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 GRSF1Q12849 480 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC43-202ENST00000457422 TEAD4Q15561 434 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 TANGO2Q6ICL3 276 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 PNCKQ6P2M8 343 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 VTCN1Q7Z7D3 282 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 CACUL1Q86Y37 369 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 DCUN1D3Q8IWE4 304 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 OXR1Q8N573 874 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 PIK3C3Q8NEB9 887 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 WDR48Q8TAF3 677 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 MTERF3Q96E29 417 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 OR51B5Q9H339 312 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 LIN28AQ9H9Z2 209 aaKnown RBP16.01■□□□□ 0.15
CCDC43-202ENST00000457422 BLOC1S6Q9UL45 172 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 CDH7Q9ULB5 785 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 ASF1AQ9Y294 204 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 TRIM64BA6NI03 449 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 TGFB1P01137 390 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 PCCBP05166 539 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 IL7RP16871 459 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 EEF1B2P24534 225 aaKnown RBP16.01■□□□□ 0.15
CCDC43-202ENST00000457422 IGFBP5P24593 272 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 POLR2IP36954 125 aaKnown RBP16.01■□□□□ 0.15
CCDC43-202ENST00000457422 MVDP53602 400 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 ERVK-21P61565 698 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 IQCCQ4KMZ1 466 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 FAM46CQ5VWP2 391 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 EGFLAMQ63HQ2 1017 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 KDM4DQ6B0I6 523 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 FAM71E1Q6IPT2 247 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 VITQ6UXI7 678 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 CEP68Q76N32 757 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 AMZ2Q86W34 360 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 HEATR4Q86WZ0 1026 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 FAM129CQ86XR2 697 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 OR5AR1Q8NGP9 310 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 OR13F1Q8NGS4 319 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 C16orf78Q8WTQ4 265 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 TMEM9Q9P0T7 183 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 BAG5Q9UL15 447 aa16.01■□□□□ 0.15
CCDC43-202ENST00000457422 DNMT3AQ9Y6K1 912 aaPredicted RBP16.01■□□□□ 0.15
CCDC43-202ENST00000457422 hCG_2039718K7EN88 272 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 KLHL18O94889 574 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 GSTM2P28161 218 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 CRYBA2P53672 197 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 NUP107P57740 925 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 FCHO2Q0JRZ9 810 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 ARHGAP19Q14CB8 494 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 MEP1AQ16819 746 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 CTU2Q2VPK5 515 aaKnown RBP16■□□□□ 0.15
CCDC43-202ENST00000457422 LAIR2Q6ISS4 152 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 LRRTM4Q86VH4 590 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 CYP4Z1Q86W10 505 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 C2orf73Q8N5S3 287 aaPredicted RBP16■□□□□ 0.15
CCDC43-202ENST00000457422 C11orf65Q8NCR3 313 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 ZNF740Q8NDX6 193 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 ZNF566Q969W8 418 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 DTNBP1Q96EV8 351 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 BARD1Q99728 777 aaKnown RBP16■□□□□ 0.15
CCDC43-202ENST00000457422 ADNPQ9H2P0 1102 aa16■□□□□ 0.15
CCDC43-202ENST00000457422 BCKDKO14874 412 aa15.99■□□□□ 0.15
CCDC43-202ENST00000457422 GPR37L1O60883 481 aa15.99■□□□□ 0.15
CCDC43-202ENST00000457422 UGT2B11O75310 529 aa15.99■□□□□ 0.15
CCDC43-202ENST00000457422 GJA4P35212 333 aa15.99■□□□□ 0.15
CCDC43-202ENST00000457422 DRD3P35462 400 aa15.99■□□□□ 0.15
CCDC43-202ENST00000457422 EIF2DP41214 584 aaKnown RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms