RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 FAM107AO95990 144 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 PCNAP12004 261 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 FGF5P12034 268 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 FOLR1P15328 257 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 PCSK2P16519 638 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 ARL4DP49703 201 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 SEPHS1P49903 392 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 NOVA1P51513 510 aaKnown RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 STXBP1P61764 594 aaKnown RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 RPS13P62277 151 aaKnown RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 IRX1P78414 480 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 SIM1P81133 766 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 RGS1Q08116 209 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 CYP4F3Q08477 520 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 TBL3Q12788 808 aaKnown RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 IL11RAQ14626 422 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 KIAA0040Q15053 153 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 SNAP47Q5SQN1 464 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 KHDRBS2Q5VWX1 349 aaKnown RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 TMEM214Q6NUQ4 689 aaKnown RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 GALNT18Q6P9A2 607 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 TLDC1Q6P9B6 456 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 CHSY3Q70JA7 882 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 LARP4Q71RC2 724 aaKnown RBP eCLIP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 TMPRSS12Q86WS5 348 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 PARP9Q8IXQ6 854 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 OR4N4Q8N0Y3 316 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 CSNK1A1LQ8N752 337 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 SRFBP1Q8NEF9 429 aaKnown RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 OR2T11Q8NH01 316 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 RERGQ96A58 199 aaPredicted RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 MS4A6EQ96DS6 147 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 PPP3R2Q96LZ3 170 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 C3orf30Q96M34 536 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 MTERF1Q99551 399 aaKnown RBP10.73□□□□□ -0.69
TRAF4-206ENST00000454852 CCDC28BQ9BUN5 200 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 NLNQ9BYT8 704 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 NUF2Q9BZD4 464 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 B3GNT4Q9C0J1 378 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 STRADBQ9C0K7 418 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 AICDAQ9GZX7 198 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 SYNDIG1Q9H7V2 258 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 FANCEQ9HB96 536 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 FBXO8Q9NRD0 319 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 RIC8BQ9NVN3 520 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 ASIC5Q9NY37 505 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 VPS29Q9UBQ0 182 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 CLCA2Q9UQC9 943 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 TMED5Q9Y3A6 229 aa10.73□□□□□ -0.69
TRAF4-206ENST00000454852 CEP250Q9BV73 2442 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 SPAARA0A1B0GVQ0 90 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 URADA6NGE7 173 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 A8MU76 341 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 LSM1O15116 133 aaKnown RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 P2RX6O15547 441 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 NDUFS4O43181 175 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CSO75390 466 aaKnown RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 SKAP2O75563 359 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 ETHE1O95571 254 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 LINC00032P0C843 101 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 KITP10721 976 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CSTF2P33240 577 aaKnown RBP eCLIP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 IDH3AP50213 366 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 AQP5P55064 265 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 MC2RQ01718 297 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 FAM53BQ14153 422 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 GRM7Q14831 915 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 PDCD2Q16342 344 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 RSPO4Q2I0M5 234 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 WASHC2DQ5SRD0 308 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 PHF19Q5T6S3 580 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 HES3Q5TGS1 186 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 FAM219BQ5XKK7 198 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 NIPAL1Q6NVV3 410 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 DHRS13Q6UX07 377 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CPLX4Q7Z7G2 160 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 ZFAND4Q86XD8 727 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 DDIASQ8IXT1 998 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 METTL4Q8N3J2 472 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 RCBTB1Q8NDN9 531 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 OR2L5Q8NG80 312 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CEP70Q8NHQ1 597 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CHTF18Q8WVB6 975 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CCT6BQ92526 530 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 GAL3ST3Q96A11 431 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CCT8L2Q96SF2 557 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CMKLR1Q99788 373 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CENPKQ9BS16 269 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 ZNF717Q9BY31 904 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 REXO4Q9GZR2 422 aaKnown RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 CLK4Q9HAZ1 481 aaKnown RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 NPHS2Q9NP85 383 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 FGF21Q9NSA1 209 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 C1orf109Q9NX04 203 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 AHSPQ9NZD4 102 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 AKAP7Q9P0M2 348 aaPredicted RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 SERTAD3Q9UJW9 196 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 ADAM29Q9UKF5 820 aa10.72□□□□□ -0.69
TRAF4-206ENST00000454852 RUVBL1Q9Y265 456 aaKnown RBP10.72□□□□□ -0.69
TRAF4-206ENST00000454852 FIS1Q9Y3D6 152 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms