RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 SLBPQ14493 270 aaKnown RBP eCLIP6.3□□□□□ -1.4
USP46-202ENST00000451218 ABRAXAS1Q6UWZ7 409 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 VN1R4Q7Z5H5 301 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 AMIGO2Q86SJ2 522 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 ZNF605Q86T29 641 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 FAM124AQ86V42 546 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 DHFR2Q86XF0 187 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 CCDC71Q8IV32 467 aaPredicted RBP6.3□□□□□ -1.4
USP46-202ENST00000451218 AFAP1L2Q8N4X5 818 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 TRPV3Q8NET8 790 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 N4BP2L2Q92802 583 aaPredicted RBP6.3□□□□□ -1.4
USP46-202ENST00000451218 GUCD1Q96NT3 240 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 TRAPPC9Q96Q05 1148 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 MYNNQ9NPC7 610 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 ANGPTL2Q9UKU9 493 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 MMP17Q9ULZ9 603 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 PCDHGA11Q9Y5H2 935 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 LRATO95237 230 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 RASAL1O95294 804 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 TFAP2AP05549 437 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 PRPS2P11908 318 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 KCNK10P57789 538 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 UBE2IP63279 158 aaKnown RBP6.3□□□□□ -1.4
USP46-202ENST00000451218 KCNJ10P78508 379 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 RPE65Q16518 533 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 GALNT10Q86SR1 603 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 TMPRSS11BQ86T26 416 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 AMZ2Q86W34 360 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 DCUN1D3Q8IWE4 304 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 TBC1D21Q8IYX1 336 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 ANKK1Q8NFD2 765 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 OR10A6Q8NH74 314 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 TM4SF18Q96CE8 201 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 MED8Q96G25 268 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 C10orf90Q96M02 699 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 DPH2Q9BQC3 489 aaPredicted RBP6.3□□□□□ -1.4
USP46-202ENST00000451218 ARHGAP9Q9BRR9 750 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 BTNL2Q9UIR0 455 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 CHST2Q9Y4C5 530 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 SCN3AQ9NY46 2000 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 ALPLP05186 524 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 RETP07949 1114 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 HMOX2P30519 316 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 PLAURQ03405 335 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 MAP7Q14244 749 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 SMAD2Q15796 467 aaKnown RBP6.3□□□□□ -1.4
USP46-202ENST00000451218 ALG11Q2TAA5 492 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 FCRL6Q6DN72 434 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 HS3ST5Q8IZT8 346 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 OR52E1Q8NGJ3 308 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 OR2L8Q8NGY9 312 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 C16orf78Q8WTQ4 265 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 SETD7Q8WTS6 366 aaKnown RBP6.3□□□□□ -1.4
USP46-202ENST00000451218 TFGQ92734 400 aaPredicted RBP6.3□□□□□ -1.4
USP46-202ENST00000451218 QRFPRQ96P65 431 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 CIB1Q99828 191 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 AMBRA1Q9C0C7 1298 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 MUC13Q9H3R2 512 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 WDR26Q9H7D7 661 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 PELI2Q9HAT8 420 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 SGK2Q9HBY8 427 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 PRDM7Q9NQW5 492 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 C1GALT1Q9NS00 363 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 CLDN16Q9Y5I7 305 aa6.3□□□□□ -1.4
USP46-202ENST00000451218 SCN2AQ99250 2005 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 DHRS12A0PJE2 317 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 TRIM64BA6NI03 449 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 CHURC1-FNTBB4DL54 471 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 CFAP99D6REC4 459 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 SAP18O00422 153 aaKnown RBP6.29□□□□□ -1.4
USP46-202ENST00000451218 BTN3A3O00478 584 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 RNASET2O00584 256 aaKnown RBP6.29□□□□□ -1.4
USP46-202ENST00000451218 HAT1O14929 419 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 ANGPT2O15123 496 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 CIB2O75838 187 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 MT-ND1P03886 318 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 HTR1AP08908 422 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 MAPK9P45984 424 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 IST1P53990 364 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 MRPS21P82921 87 aaKnown RBP6.29□□□□□ -1.4
USP46-202ENST00000451218 HKDC1Q2TB90 917 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 FAM180BQ6P0A1 224 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 C2orf73Q8N5S3 287 aaPredicted RBP6.29□□□□□ -1.4
USP46-202ENST00000451218 GFM2Q969S9 779 aaKnown RBP6.29□□□□□ -1.4
USP46-202ENST00000451218 REXO5Q96IC2 774 aaKnown RBP6.29□□□□□ -1.4
USP46-202ENST00000451218 CAMK1GQ96NX5 476 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 NR1H4Q96RI1 486 aaPredicted RBP6.29□□□□□ -1.4
USP46-202ENST00000451218 C6orf106Q9H6K1 298 aaPredicted RBP6.29□□□□□ -1.4
USP46-202ENST00000451218 KIR3DX1Q9H7L2 352 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 ZNF696Q9H7X3 374 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 ABCG2Q9UNQ0 655 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 PCSK5Q92824 1860 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 SNPHO15079 494 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 KMOO15229 486 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 SCELO95171 688 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 MED26O95402 600 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 HOXB2P14652 356 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 ACVR2AP27037 513 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 PIGAP37287 484 aa6.29□□□□□ -1.4
USP46-202ENST00000451218 EMP3P54852 163 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms