RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 PTPN13Q12923 2485 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 SIPA1L1O43166 1804 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 LAMA4Q16363 1823 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 CEP350Q5VT06 3117 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 H3BQF6 201 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 FEN1P39748 380 aaKnown RBP8.11□□□□□ -1.11
HCG18-238ENST00000449544 CYB561P49447 251 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 PFN3P60673 137 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 KCTD19Q17RG1 926 aaPredicted RBP8.11□□□□□ -1.11
HCG18-238ENST00000449544 RNF44Q7L0R7 432 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 LRRC70Q7Z2Q7 622 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 RPS19BP1Q86WX3 136 aaKnown RBP8.11□□□□□ -1.11
HCG18-238ENST00000449544 PIANPQ8IYJ0 282 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 PGBD5Q8N414 524 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 GBP7Q8N8V2 638 aaPredicted RBP8.11□□□□□ -1.11
HCG18-238ENST00000449544 NOA1Q8NC60 698 aaKnown RBP8.11□□□□□ -1.11
HCG18-238ENST00000449544 TMCO6Q96DC7 493 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 ZBED6CLQ96FA7 236 aaPredicted RBP8.11□□□□□ -1.11
HCG18-238ENST00000449544 SFXN2Q96NB2 322 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 LRRC37BQ96QE4 947 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 ZNF160Q9HCG1 818 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 GID8Q9NWU2 228 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 N6AMT1Q9Y5N5 214 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 CAPN7Q9Y6W3 813 aa8.11□□□□□ -1.11
HCG18-238ENST00000449544 MCIDASD6RGH6 385 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 NPIPA5E9PKD4 350 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 SLCO1B7G3V0H7 640 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 AZIN1O14977 448 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 GDF1P27539 372 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 ZNF41P51814 821 aaPredicted RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 NCBP2P52298 156 aaKnown RBP eCLIP8.1□□□□□ -1.112e-7■□□□□ 8.7
HCG18-238ENST00000449544 CASP9P55211 416 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 SH3BP2P78314 561 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 LACTB2Q53H82 288 aaPredicted RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 HENMT1Q5T8I9 393 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 FAM199XQ6PEV8 388 aaPredicted RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 MTERF4Q7Z6M4 381 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 CLHC1Q8NHS4 586 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 THAP4Q8WY91 577 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 PTCD3Q96EY7 689 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 DHRS4Q9BTZ2 278 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 ZNF717Q9BY31 904 aaPredicted RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 KCNN2Q9H2S1 579 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 TIGARQ9NQ88 270 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 LYARQ9NX58 379 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 MAT2BQ9NZL9 334 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 PPP4R1LQ9P1A2 415 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 MARCH4Q9P2E8 410 aaPredicted RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 NPIPA1Q9UND3 350 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 TRBV11-1A0A0K0K1C0 115 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 SCDO00767 359 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 PPM1DO15297 605 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 PCDH7O60245 1069 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 TMEM63AO94886 807 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 KRT75O95678 551 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 CAPN1P07384 714 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 LINC00271P0C7V0 271 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 XKP51811 444 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 KCNC4Q03721 635 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 ARHGAP19Q14CB8 494 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 C16orf72Q14CZ0 275 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 FRG2Q64ET8 278 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 FAM217AQ8IXS0 508 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 KLHDC8AQ8IYD2 350 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 CYP4Z2PQ8N1L4 340 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 ZNF527Q8NB42 609 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 TP53I13Q8NBR0 393 aaPredicted RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 OR5K2Q8NHB8 316 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 RIN3Q8TB24 985 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 FAM120BQ96EK7 910 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 FRG2BQ96QU4 278 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 TEX101Q9BY14 249 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 NRSN2Q9GZP1 204 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 RPF2Q9H7B2 306 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 LRTM1Q9HBL6 345 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 KRCC1Q9NPI7 259 aaPredicted RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 ZCCHC3Q9NUD5 404 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 SLC17A4Q9Y2C5 497 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 MSRB2Q9Y3D2 182 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 TIMM22Q9Y584 194 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 IGF2RP11717 2491 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 CCT8L1PA6NM43 557 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 SNX4O95219 450 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 RORAP35398 523 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 SLC16A1P53985 500 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 TMEM259Q4ZIN3 620 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 RBM20Q5T481 1227 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 METRNLQ641Q3 311 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 CADM2Q8N3J6 435 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 CNEP1R1Q8N9A8 125 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 FBXO30Q8TB52 745 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 TBCDQ9BTW9 1192 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 MENTQ9BUN1 341 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 MRPL1Q9BYD6 325 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 ALOXE3Q9BYJ1 711 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 TSPAN10Q9H1Z9 355 aaPredicted RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 MRM3Q9HC36 420 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 PARD6AQ9NPB6 346 aa8.1□□□□□ -1.11
HCG18-238ENST00000449544 DMGDHQ9UI17 866 aaKnown RBP8.1□□□□□ -1.11
HCG18-238ENST00000449544 FADS2P1A8MWK0 482 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms