RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 DENND2DQ9H6A0 471 aaPredicted RBP12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 WRAP73Q9P2S5 460 aaPredicted RBP12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 LAMP5Q9UJQ1 280 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 MAN2B2Q9Y2E5 1009 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 MRC1P22897 1456 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 LASP1Q14847 261 aaKnown RBP12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 FOXRED2Q8IWF2 684 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 CCDC116Q8IYX3 515 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 ZNF781Q8N8C0 355 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 OR8K5Q8NH50 307 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 DIRAS2Q96HU8 199 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 CAMK1GQ96NX5 476 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 OR51B6Q9H340 312 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 SLC17A6Q9P2U8 582 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 PRPF19Q9UMS4 504 aaKnown RBP12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 POLR1CO15160 346 aaPredicted RBP12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 PLATP00750 562 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 SRPRAP08240 638 aaKnown RBP12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 SPARCP09486 303 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 MALLQ13021 153 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 PDK3Q15120 406 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 DEFB110Q30KQ9 67 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 SCGB2B2Q4G0G5 96 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 SMYD5Q6GMV2 418 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 OR4F3Q6IEY1 312 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 ALDH16A1Q8IZ83 802 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 ALG3Q92685 438 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 FAM117AQ9C073 453 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 SLC5A7Q9GZV3 580 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 UBAP1Q9NZ09 502 aa12.34□□□□□ -0.43
AC006001.3-201ENST00000449307 TCRBV7S2A1N4TA0A589 114 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 TULP2O00295 520 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 NUAK1O60285 661 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 NOBOXO60393 691 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 KLF10Q13118 480 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 DSG2Q14126 1118 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 AGTRAPQ6RW13 159 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 TMEM17Q86X19 198 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 TCEANCQ8N8B7 351 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 OR56A1Q8NGH5 318 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 OR5L2Q8NGL0 311 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 TMEM68Q96MH6 324 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 LTBP3Q9NS15 1303 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 MPPED1O15442 326 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 ARSAP15289 507 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 CNEP1R1Q8N9A8 125 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 TCEAL3Q969E4 200 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 LOC730098B7Z3J9 87 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 VILLO15195 856 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 AOC1P19801 751 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 TAS2R39P59534 338 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 CDKN3Q16667 212 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 SYT16Q17RD7 645 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 CRTC2Q53ET0 693 aaPredicted RBP12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 LRIF1Q5T3J3 769 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 CCDC120Q96HB5 630 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 ZNF576Q9H609 170 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 FAM149AA5PLN7 773 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 EFCAB9A8MZ26 197 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 J3QLW9 94 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 HRGP04196 525 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 KCNE1P15382 129 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 ZNF19P17023 458 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 SLC39A4Q6P5W5 647 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 CILP2Q8IUL8 1156 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 FAM86B1Q8N7N1 296 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 OSBPL11Q9BXB4 747 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 POLR2J3Q9H1A7 115 aaKnown RBP12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 SLC39A1Q9NY26 324 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 PCDHB14Q9Y5E9 798 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 ITGA10O75578 1167 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 GGT2P36268 569 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 IRF5Q13568 498 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 DUS1LQ6P1R4 473 aaKnown RBP12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 C3orf33Q6P1S2 294 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 SHISA6Q6ZSJ9 500 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 NRROSQ86YC3 692 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 SCAMP4Q969E2 229 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 HSPBAP1Q96EW2 488 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 SLC17A9Q9BYT1 436 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 IGSF9Q9P2J2 1179 aa12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 RPH3AQ9Y2J0 694 aaPredicted RBP12.33□□□□□ -0.44
AC006001.3-201ENST00000449307 CCRL2O00421 344 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 PRPS1L1P21108 318 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 TIGD6Q17RP2 521 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 C5orf22Q49AR2 442 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 NCBP2-AS2Q69YL0 99 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 KIAA0930Q6ICG6 404 aaPredicted RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 DPY19L3Q6ZPD9 716 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ZNF516Q92618 1163 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ZNF641Q96N77 438 aaPredicted RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 ZFP3Q96NJ6 502 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 SLC2A6Q9UGQ3 507 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 KAT6AQ92794 2004 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 SMAD9O15198 467 aaKnown RBP12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 SLC16A5O15375 505 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 KCNJ13O60928 360 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 CEBPBP17676 345 aa12.32□□□□□ -0.44
AC006001.3-201ENST00000449307 AP1S2P56377 157 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms