RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 CXorf56Q9H5V9 222 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR6C2Q9NZP2 312 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ANGPT4Q9Y264 503 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 NRXN2Q9P2S2 1712 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 A0A0U1RQJ8 604 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 A0A1W2PP18 115 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TUBAL3A6NHL2 446 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 GJE1A6NN92 205 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 RAD51CO43502 376 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SERPINB1P30740 379 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CYB561P49447 251 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 WNT7BP56706 349 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 NXPH1P58417 271 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM133BQ5BKY9 247 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 GUSBP11Q6P575 273 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CCDC121Q6ZUS5 278 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PAQR9Q6ZVX9 377 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ASB5Q8WWX0 329 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 RHBDF1Q96CC6 855 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC39A13Q96H72 371 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZFYVE21Q9BQ24 234 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 STRA6Q9BX79 667 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 ADAP2Q9NPF8 381 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SPATA7Q9P0W8 599 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 KLK13Q9UKR3 277 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SCN3AQ9NY46 2000 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 FARS2O95363 451 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TPSB2P20231 275 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PTGS2P35354 604 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 NFE2L1Q14494 772 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 HERC3Q15034 1050 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 TPSAB1Q15661 275 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 NKPD1Q17RQ9 610 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PLEKHS1Q5SXH7 462 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 NCBP2-AS2Q69YL0 99 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SULT1C3Q6IMI6 304 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC22A25Q6T423 547 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 PCYOX1LQ8NBM8 494 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 RNASE11Q8TAA1 199 aaKnown RBP5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 MS4A12Q9NXJ0 267 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 FKBP7Q9Y680 259 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CAPN6Q9Y6Q1 641 aa5.43□□□□□ -1.54
CDC42BPA-209ENST00000448940 CDX4O14627 284 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM107AO95990 144 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CSTBP04080 98 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZDHHC11BP0C7U3 371 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 C8orf89P0DMQ9 161 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CLCN2P51788 898 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 MANFP55145 182 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CAMK1Q14012 370 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 IL20RBQ6UXL0 311 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 TSPAN33Q86UF1 283 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMCO6Q96DC7 493 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 HSPBAP1Q96EW2 488 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 THUMPD3Q9BV44 507 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 RHOJQ9H4E5 214 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 ZNF556Q9HAH1 456 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 NOVA2Q9UNW9 492 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PCDHGA1Q9Y5H4 931 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 SPTY2D1-AS1A0A0U1RR47 76 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM237BA0A1B0GVD1 139 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 A6NLC8 198 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 S100A9P06702 114 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 NME1P15531 152 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CHRNB2P17787 502 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 BMP6P22004 513 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 BDKRB1P46663 353 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 RAB10P61026 200 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PPP2CBP62714 309 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PPP2CAP67775 309 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 NRG1Q02297 640 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 BNIP1Q12981 228 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 GBX1Q14549 363 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CYTH1Q15438 398 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 TMEM52BQ4KMG9 183 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 FNDC5Q8NAU1 212 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR4C6Q8NH72 309 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PPCDCQ96CD2 204 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PIWIL1Q96J94 861 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 MENTQ9BUN1 341 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 YAE1D1Q9NRH1 226 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 SLC9A8Q9Y2E8 581 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 RPH3AQ9Y2J0 694 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 POM121BA6NF01 834 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 H3BQF6 201 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 UNC5CO95185 931 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 ITIH1P19827 911 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 PCSK6P29122 969 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 RPL4P36578 427 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 EMP3P54852 163 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 HSD17B7P56937 341 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 RPS15AP62244 130 aaKnown RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 CYP51A1Q16850 503 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 FAM153CQ494X1 144 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 ARL9Q6T311 187 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 OR9K2Q8NGE7 335 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 GABRG3Q99928 467 aa5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.42□□□□□ -1.54
CDC42BPA-209ENST00000448940 TFR2Q9UP52 801 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms