RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 LOC105369274A0A096LPK9 316 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 LOC102723532A0A0G2JNH3 316 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 IGHV5-10-1A0A0J9YXX1 117 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 LRIT2A6NDA9 550 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 D6RAR5 112 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 NPIPB8E9PQR5 432 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 SAP18O00422 153 aaKnown RBP18.64■□□□□ 0.58
SGCE-207ENST00000447873 TBX6O95947 436 aaPredicted RBP18.64■□□□□ 0.58
SGCE-207ENST00000447873 EIF2S1P05198 315 aaKnown RBP18.64■□□□□ 0.58
SGCE-207ENST00000447873 THRAP10827 490 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 ERVK-8P63133 956 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 RPL38P63173 70 aaKnown RBP18.64■□□□□ 0.58
SGCE-207ENST00000447873 RGS1Q08116 209 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 ILKQ13418 452 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 PWP1Q13610 501 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 RFTN2Q52LD8 501 aaPredicted RBP18.64■□□□□ 0.58
SGCE-207ENST00000447873 CCDC157Q569K6 752 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 TMTC4Q5T4D3 741 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 DEPDC1Q5TB30 811 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 TMEM198Q66K66 360 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 OGFOD2Q6N063 350 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 PIP4P1Q86T03 277 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 ZFAND4Q86XD8 727 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 OR4N4Q8N0Y3 316 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 ZNF655Q8N720 491 aaPredicted RBP18.64■□□□□ 0.58
SGCE-207ENST00000447873 CAMKVQ8NCB2 501 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 KLHL6Q8WZ60 621 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 N4BP2L2Q92802 583 aaPredicted RBP18.64■□□□□ 0.58
SGCE-207ENST00000447873 APIPQ96GX9 242 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 F2RL3Q96RI0 385 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 MACROD1Q9BQ69 325 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 MRPL1Q9BYD6 325 aaKnown RBP18.64■□□□□ 0.58
SGCE-207ENST00000447873 AHSPQ9NZD4 102 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 G3BP2Q9UN86 482 aaKnown RBP18.64■□□□□ 0.58
SGCE-207ENST00000447873 PLCL2Q9UPR0 1127 aa18.64■□□□□ 0.58
SGCE-207ENST00000447873 UBDO15205 165 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 HCRTR1O43613 425 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 SRPX2O60687 465 aaPredicted RBP18.64■□□□□ 0.57
SGCE-207ENST00000447873 DCTN3O75935 186 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 ANKRD34CP0C6C1 535 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 NELFEP18615 380 aaKnown RBP18.64■□□□□ 0.57
SGCE-207ENST00000447873 EMX2Q04743 252 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 ACSM2AQ08AH3 577 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 MAD2L1Q13257 205 aaPredicted RBP18.64■□□□□ 0.57
SGCE-207ENST00000447873 SMU1Q2TAY7 513 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 TMEM35AQ53FP2 167 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 SPIN4Q56A73 249 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 ACSM2BQ68CK6 577 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 SPATA19Q7Z5L4 167 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 MTDHQ86UE4 582 aaKnown RBP18.64■□□□□ 0.57
SGCE-207ENST00000447873 NT5CQ8TCD5 201 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 TM4SF19Q96DZ7 209 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 METTL2AQ96IZ6 378 aaKnown RBP18.64■□□□□ 0.57
SGCE-207ENST00000447873 SLC41A2Q96JW4 573 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 C1orf50Q9BV19 199 aa18.64■□□□□ 0.57
SGCE-207ENST00000447873 REXO4Q9GZR2 422 aaKnown RBP18.64■□□□□ 0.57
SGCE-207ENST00000447873 CCDC22O60826 627 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 RFPL3O75679 317 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 SEMA3DO95025 777 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 HNRNPH1P31943 449 aaKnown RBP18.63■□□□□ 0.57
SGCE-207ENST00000447873 RAP1GDS1P52306 607 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 LIMK1P53667 647 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 VSX2P58304 361 aaPredicted RBP18.63■□□□□ 0.57
SGCE-207ENST00000447873 STXBP1P61764 594 aaKnown RBP18.63■□□□□ 0.57
SGCE-207ENST00000447873 E2F1Q01094 437 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 TBL3Q12788 808 aaKnown RBP18.63■□□□□ 0.57
SGCE-207ENST00000447873 HYAL2Q12891 473 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 KCNAB1Q14722 419 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 KIAA0040Q15053 153 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 TRIP6Q15654 476 aaKnown RBP18.63■□□□□ 0.57
SGCE-207ENST00000447873 TOR1AIP1Q5JTV8 583 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 ARHGAP22Q7Z5H3 698 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 D2HGDHQ8N465 521 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 CSNK1A1LQ8N752 337 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 RCBTB1Q8NDN9 531 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 MARK4Q96L34 752 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 CCDC74BQ96LY2 380 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 CATSPER2Q96P56 530 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 LRRC37BQ96QE4 947 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 NLNQ9BYT8 704 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 SLC6A16Q9GZN6 736 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 EIF3LQ9Y262 564 aaKnown RBP18.63■□□□□ 0.57
SGCE-207ENST00000447873 TMED5Q9Y3A6 229 aa18.63■□□□□ 0.57
SGCE-207ENST00000447873 MYO1DO94832 1006 aa18.62■□□□□ 0.57
SGCE-207ENST00000447873 ALDOCP09972 364 aaKnown RBP18.62■□□□□ 0.57
SGCE-207ENST00000447873 ADPRMQ3LIE5 342 aa18.62■□□□□ 0.57
SGCE-207ENST00000447873 MANEAQ5SRI9 462 aa18.62■□□□□ 0.57
SGCE-207ENST00000447873 PHF19Q5T6S3 580 aa18.62■□□□□ 0.57
SGCE-207ENST00000447873 C1orf52Q8N6N3 182 aaKnown RBP18.62■□□□□ 0.57
SGCE-207ENST00000447873 CHTF18Q8WVB6 975 aa18.62■□□□□ 0.57
SGCE-207ENST00000447873 RGMAQ96B86 450 aa18.62■□□□□ 0.57
SGCE-207ENST00000447873 NMUR2Q9GZQ4 415 aa18.62■□□□□ 0.57
SGCE-207ENST00000447873 KLHL31Q9H511 634 aa18.62■□□□□ 0.57
SGCE-207ENST00000447873 NOP53Q9NZM5 478 aaKnown RBP18.62■□□□□ 0.57
SGCE-207ENST00000447873 PCNX2A6NKB5 2137 aa18.62■□□□□ 0.57
SGCE-207ENST00000447873 FCHO1O14526 889 aa18.61■□□□□ 0.57
SGCE-207ENST00000447873 TXNDC9O14530 226 aa18.61■□□□□ 0.57
SGCE-207ENST00000447873 ZSCAN9O15535 394 aaPredicted RBP18.61■□□□□ 0.57
SGCE-207ENST00000447873 P2RX6O15547 441 aa18.61■□□□□ 0.57
SGCE-207ENST00000447873 MAPK1P28482 360 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms