RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 KDELC2Q7Z4H8 507 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 DNAJC5GQ8N7S2 189 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 SLC37A3Q8NCC5 494 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 SOCS4Q8WXH5 440 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 UBE2FQ969M7 185 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 NTAN1Q96AB6 310 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 EXOC2Q96KP1 924 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 SENP8Q96LD8 212 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 NSUN5Q96P11 429 aaKnown RBP18.54■□□□□ 0.56
HMGA1-205ENST00000447654 ZBTB18Q99592 522 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 TMLHEQ9NVH6 421 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 COX16Q9P0S2 106 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 FAM240BA0A1B0GVZ2 78 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 FGF18O76093 207 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 OR5F1O95221 314 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 CCNDBP1O95273 360 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 IFNA14P01570 189 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 EPHA2P29317 976 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 ST3GAL4Q11206 333 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 GTF2H3Q13889 308 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 MICAQ29983 383 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 HSD17B12Q53GQ0 312 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 ZNF605Q86T29 641 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 ADAM30Q9UKF2 790 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 ZNF490Q9ULM2 529 aaPredicted RBP18.54■□□□□ 0.56
HMGA1-205ENST00000447654 MGAT4AQ9UM21 535 aa18.54■□□□□ 0.56
HMGA1-205ENST00000447654 hCG_1807616A0A1W2PRN6 198 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 MYBPHLA2RUH7 354 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 I6L893 689 aaPredicted RBP18.53■□□□□ 0.56
HMGA1-205ENST00000447654 ABCD4O14678 606 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 SH3BP5O60239 455 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 RHOBTB1O94844 696 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 SLC10A3P09131 477 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 SLC2A4P14672 509 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 FDXRP22570 491 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 ADRA1AP35348 466 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 SUOXP51687 545 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 SCAPQ12770 1279 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 EXOSC2Q13868 293 aaKnown RBP18.53■□□□□ 0.56
HMGA1-205ENST00000447654 PYDC2Q56P42 97 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 DDI2Q5TDH0 399 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 LRRC17Q8N6Y2 441 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 OR2T11Q8NH01 316 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 NETO1Q8TDF5 533 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 DPYSL5Q9BPU6 564 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 TTPALQ9BTX7 342 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 RDH8Q9NYR8 311 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 MAB21L2Q9Y586 359 aa18.53■□□□□ 0.56
HMGA1-205ENST00000447654 ARL5CA6NH57 179 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 SMLR1H3BR10 107 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 PCDH17O14917 1159 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 GMDSO60547 372 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 KERAO60938 352 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 PMPCBO75439 489 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 IL1AP01583 271 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 JCHAINP01591 159 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 SCG5P05408 212 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 HSMCR30P0CW71 290 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 MAPKAPK2P49137 400 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 ABATP80404 500 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 TSC22D1Q15714 1073 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 ZNF789Q5FWF6 425 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 TRIQKQ629K1 86 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 CILP2Q8IUL8 1156 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 DIRAS2Q96HU8 199 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 P2RY13Q9BPV8 354 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 WACQ9BTA9 647 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 ACTL8Q9H568 366 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 UBP1Q9NZI7 540 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 LIPT1Q9Y234 373 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 CACNG2Q9Y698 323 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 SH3D21A4FU49 640 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 CASTOR2A6NHX0 329 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 KPNA5O15131 536 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 CLEC2LP0C7M8 214 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 CDKN2DP55273 166 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 ABRQ12979 859 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 ZMYND11Q15326 602 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 SF3A2Q15428 464 aaKnown RBP18.52■□□□□ 0.56
HMGA1-205ENST00000447654 PAN2Q504Q3 1202 aaKnown RBP18.52■□□□□ 0.56
HMGA1-205ENST00000447654 TMEM107Q6UX40 140 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 EIF3MQ7L2H7 374 aaKnown RBP18.52■□□□□ 0.56
HMGA1-205ENST00000447654 FBXO39Q8N4B4 442 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 OR4F6Q8NGB9 312 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 CREB3L4Q8TEY5 395 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 SLC25A46Q96AG3 418 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 FOPNLQ96NB1 174 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 CNPPD1Q9BV87 410 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 MIXL1Q9H2W2 232 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 SH3BP4Q9P0V3 963 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 COPS3Q9UNS2 423 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 TRPV2Q9Y5S1 764 aa18.52■□□□□ 0.56
HMGA1-205ENST00000447654 MYO1GB0I1T2 1018 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 LYRM1O43325 122 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 C9P02748 559 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 SEMG1P04279 462 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 FABP3P05413 133 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 CD9P21926 228 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 LHCGRP22888 699 aa18.51■□□□□ 0.55
HMGA1-205ENST00000447654 RECQLP46063 649 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms