RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 SMIM24O75264 130 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 STATHP02808 62 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 PRB1P04280 392 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 ZGLP1P0C6A0 271 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 PYGBP11216 843 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 SCTRP47872 440 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 KCNC1P48547 511 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 CCT5P48643 541 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 CCL11P51671 97 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 ALDH18A1P54886 795 aaKnown RBP15.55■□□□□ 0.08
SF3A1-204ENST00000447376 NFATC3Q12968 1075 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 LACTB2Q53H82 288 aaPredicted RBP15.55■□□□□ 0.08
SF3A1-204ENST00000447376 XKR6Q5GH73 641 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 TECRLQ5HYJ1 363 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 MFSD4BQ5TF39 518 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 IRAK1BP1Q5VVH5 260 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 ATG9BQ674R7 924 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 TMEM214Q6NUQ4 689 aaKnown RBP15.55■□□□□ 0.08
SF3A1-204ENST00000447376 TMIGD1Q6UXZ0 262 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 COX15Q7KZN9 410 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 PLD6Q8N2A8 252 aaKnown RBP15.55■□□□□ 0.08
SF3A1-204ENST00000447376 CCT6BQ92526 530 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 TM4SF19Q96DZ7 209 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 PTCD3Q96EY7 689 aaKnown RBP15.55■□□□□ 0.08
SF3A1-204ENST00000447376 SEC16BQ96JE7 1060 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 TMEM79Q9BSE2 394 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 TMEM109Q9BVC6 243 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 EHD1Q9H4M9 534 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 P4HTMQ9NXG6 502 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 CPSF2Q9P2I0 782 aaKnown RBP15.55■□□□□ 0.08
SF3A1-204ENST00000447376 TNPO3Q9Y5L0 923 aaKnown RBP15.55■□□□□ 0.08
SF3A1-204ENST00000447376 SLC22A7Q9Y694 548 aa15.55■□□□□ 0.08
SF3A1-204ENST00000447376 MDC1Q14676 2089 aaKnown RBP15.55■□□□□ 0.08
SF3A1-204ENST00000447376 LOC400499M0QZD8 3231 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 A0A088AWK7 358 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 ANKDD1BA6NHY2 528 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 GOLGA8RI6L899 631 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 AGPSO00116 658 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 HEXBP07686 556 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 EPB42P16452 691 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 IL1RNP18510 177 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 TAC1P20366 129 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 ZNF10P21506 573 aaPredicted RBP15.54■□□□□ 0.08
SF3A1-204ENST00000447376 PIK3CGP48736 1102 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 STXBP1P61764 594 aaKnown RBP15.54■□□□□ 0.08
SF3A1-204ENST00000447376 IRF8Q02556 426 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 KLC1Q07866 573 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 SLBPQ14493 270 aaKnown RBP eCLIP15.54■□□□□ 0.08
SF3A1-204ENST00000447376 PFKFB4Q16877 469 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 C18orf21Q32NC0 220 aaPredicted RBP15.54■□□□□ 0.08
SF3A1-204ENST00000447376 SHISA6Q6ZSJ9 500 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 PRSS58Q8IYP2 241 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 KCT2Q8NC54 265 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 OR9A4Q8NGU2 314 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 NT5CQ8TCD5 201 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 MZB1Q8WU39 189 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 UBE2E3Q969T4 207 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 ABHD17AQ96GS6 310 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 FAR2Q96K12 515 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 SPSB2Q99619 263 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 MACROD1Q9BQ69 325 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 SLC25A23Q9BV35 468 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 XPR1Q9UBH6 696 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 LGALS13Q9UHV8 139 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 C3orf18Q9UK00 162 aa15.54■□□□□ 0.08
SF3A1-204ENST00000447376 SEC16AO15027 2179 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 CACNA1GO43497 2377 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 IGLV3-12A0A075B6K2 115 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 VSTM2BA6NLU5 285 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 K7EPI3 171 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 TAPBPO15533 448 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 FOXS1O43638 330 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 CNOT3O75175 753 aaKnown RBP15.53■□□□□ 0.08
SF3A1-204ENST00000447376 GLRA3O75311 464 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 MED26O95402 600 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 UMODP07911 640 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 ALOX12P18054 663 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 VARSP26640 1264 aaKnown RBP15.53■□□□□ 0.08
SF3A1-204ENST00000447376 PGDP52209 483 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 EMP2P54851 167 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 CHAF1BQ13112 559 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 KRT71Q3SY84 523 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 TUBB8Q3ZCM7 444 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 FBXO48Q5FWF7 155 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 CPZQ66K79 652 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 TCTN3Q6NUS6 607 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 METTL2BQ6P1Q9 378 aaKnown RBP15.53■□□□□ 0.08
SF3A1-204ENST00000447376 SLCO4C1Q6ZQN7 724 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 DTWD1Q8N5C7 304 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 ZNF740Q8NDX6 193 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 UBTD2Q8WUN7 234 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 METTL21AQ8WXB1 218 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 ESAMQ96AP7 390 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 SEMA4CQ9C0C4 833 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 TGIF2Q9GZN2 237 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 NT5DC2Q9H857 520 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 SYNPO2LQ9H987 977 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 ATP13A2Q9NQ11 1180 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 ZNF358Q9NW07 568 aa15.53■□□□□ 0.08
SF3A1-204ENST00000447376 ARGLU1Q9NWB6 273 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms