RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 DOCK10Q96BY6 2186 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 A0A0G2JN53 185 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 CCDC189A1A4V9 331 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 ARGFXA6NJG6 315 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 A8MT66 165 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 ERVH48-1M5A8F1 160 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 PRPF4O43172 522 aaKnown RBP eCLIP11.31□□□□□ -0.6
RFC4-208ENST00000447345 KLHL18O94889 574 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 UMODP07911 640 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 NUDT17P0C025 328 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 SBK3P0C264 359 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 PCNAP12004 261 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 AHRP35869 848 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 RAB8AP61006 207 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 OLR1P78380 273 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 OCA2Q04671 838 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 ATP1A4Q13733 1029 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 GTF2H2Q13888 395 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 LY6DQ14210 128 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 LINC00303Q3SY05 128 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 DEFB134Q4QY38 66 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 VWA2Q5GFL6 755 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 PAGE2BQ5JRK9 111 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 GTF2H2CQ6P1K8 395 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 RPS27LQ71UM5 84 aaKnown RBP11.31□□□□□ -0.6
RFC4-208ENST00000447345 PDSS2Q86YH6 399 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 TDRPQ86YL5 185 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 RAB43Q86YS6 212 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 SHISA5Q8N114 240 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 C4orf33Q8N1A6 199 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 NT5CQ8TCD5 201 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 ACMSDQ8TDX5 336 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 MVB12AQ96EY5 273 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 NSUN5Q96P11 429 aaKnown RBP11.31□□□□□ -0.6
RFC4-208ENST00000447345 CATSPER2Q96P56 530 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 BBC3Q96PG8 261 aaPredicted RBP11.31□□□□□ -0.6
RFC4-208ENST00000447345 SPSB2Q99619 263 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 EFCAB11Q9BUY7 163 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 SARGQ9BW04 601 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 ACTR8Q9H981 624 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 PPCSQ9HAB8 311 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 ZNF282Q9UDV7 671 aaPredicted RBP11.31□□□□□ -0.6
RFC4-208ENST00000447345 RAB21Q9UL25 225 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 PLAAQ9Y263 795 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 NAALAD2Q9Y3Q0 740 aa11.31□□□□□ -0.6
RFC4-208ENST00000447345 ANKDD1BA6NHY2 528 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 C4orf51C9J302 202 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 E2F3O00716 465 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 GLRA3O75311 464 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 SH3BGRLO75368 114 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 DNAJB5O75953 348 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 NSA2O95478 260 aaKnown RBP11.3□□□□□ -0.6
RFC4-208ENST00000447345 ALBP02768 609 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 ITGB2P05107 769 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 ZGLP1P0C6A0 271 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 ALOX12P18054 663 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 TSPAN8P19075 237 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 CCR10P46092 362 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 POLE2P56282 527 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 KLC1Q07866 573 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 HYAL2Q12891 473 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 PWP1Q13610 501 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 DDX39BQ13838 428 aaKnown RBP11.3□□□□□ -0.6
RFC4-208ENST00000447345 FAM53BQ14153 422 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 PCBP2Q15366 365 aaKnown RBP eCLIP11.3□□□□□ -0.6
RFC4-208ENST00000447345 CRTC2Q53ET0 693 aaPredicted RBP11.3□□□□□ -0.6
RFC4-208ENST00000447345 MFSD4BQ5TF39 518 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 ABHD13Q7L211 337 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 VN1R5Q7Z5H4 357 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 MRGPREQ86SM8 312 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 ZC3H7AQ8IWR0 971 aaKnown RBP11.3□□□□□ -0.6
RFC4-208ENST00000447345 TRPV3Q8NET8 790 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 OR5T3Q8NGG3 340 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 STT3BQ8TCJ2 826 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 ADAMTS17Q8TE56 1095 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 CREB3L4Q8TEY5 395 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 MIEF2Q96C03 454 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 WDR34Q96EX3 536 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 CDK15Q96Q40 435 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 CRB3Q9BUF7 120 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 SLC6A16Q9GZN6 736 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 AICDAQ9GZX7 198 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 SLC26A1Q9H2B4 701 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 C12orf65Q9H3J6 166 aaKnown RBP11.3□□□□□ -0.6
RFC4-208ENST00000447345 EHD1Q9H4M9 534 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 KLHL31Q9H511 634 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 IPPKQ9H8X2 491 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 WDR54Q9H977 334 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 SEMA4BQ9NPR2 832 aaPredicted RBP11.3□□□□□ -0.6
RFC4-208ENST00000447345 PCTPQ9UKL6 214 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 TMCO1Q9UM00 188 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 MAP4K5Q9Y4K4 846 aa11.3□□□□□ -0.6
RFC4-208ENST00000447345 TNPO3Q9Y5L0 923 aaKnown RBP11.3□□□□□ -0.6
RFC4-208ENST00000447345 H0YIG0 161 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 STX16-NPEPL1H3BU86 382 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 MASP2O00187 686 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 COPEO14579 308 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 OR7A17O14581 309 aa11.29□□□□□ -0.6
RFC4-208ENST00000447345 STX16O14662 325 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms