RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 PPT2Q9UMR5 302 aa10.37□□□□□ -0.75
CCDC12-203ENST00000446836 SPTBP11277 2137 aa10.37□□□□□ -0.75
CCDC12-203ENST00000446836 ACACAQ13085 2346 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 A0A087WV48 116 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 A0A088AWK7 358 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 C9J4A7 227 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 H0YIG0 161 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 P2RX6O15547 441 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ATP8B1O43520 1251 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 NPHS1O60500 1241 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 SNUPNO95149 360 aaKnown RBP10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ESRRBO95718 433 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ALBP02768 609 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 SERPIND1P05546 499 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ENO1P06733 434 aaKnown RBP10.36□□□□□ -0.75
CCDC12-203ENST00000446836 BPGMP07738 259 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 CTSBP07858 339 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 RAB40ALP0C0E4 278 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 DHRS4L1P0CG22 281 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ZNF10P21506 573 aaPredicted RBP10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ALAS2P22557 587 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 AVPR1BP47901 424 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 SERPINB4P48594 390 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ARFIP1P53367 373 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 UCNP55089 124 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 CDH13P55290 713 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ZNF33BQ06732 778 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 GALNT1Q10472 559 aaPredicted RBP10.36□□□□□ -0.75
CCDC12-203ENST00000446836 CLN3Q13286 438 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 TMEM35AQ53FP2 167 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 PRAMEF17Q5VTA0 474 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 BROXQ5VW32 411 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ZNF385CQ66K41 422 aaPredicted RBP10.36□□□□□ -0.75
CCDC12-203ENST00000446836 FRMD7Q6ZUT3 714 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 GPRIN3Q6ZVF9 776 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 C10orf107Q8IVU9 208 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.36□□□□□ -0.752e-11■■■■■ 142.1
CCDC12-203ENST00000446836 ARHGEF39Q8N4T4 335 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 OR4F6Q8NGB9 312 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 TRPC4APQ8TEL6 797 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 MR1Q95460 341 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 FKBP10Q96AY3 582 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 CMTM7Q96FZ5 175 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 C10orf90Q96M02 699 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 NSUN5Q96P11 429 aaKnown RBP10.36□□□□□ -0.75
CCDC12-203ENST00000446836 CENPKQ9BS16 269 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 SLC29A3Q9BZD2 475 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 SLC6A16Q9GZN6 736 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 C12orf65Q9H3J6 166 aaKnown RBP10.36□□□□□ -0.75
CCDC12-203ENST00000446836 GSTO2Q9H4Y5 243 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 SYNPO2LQ9H987 977 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 ANKHQ9HCJ1 492 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 NKIRAS1Q9NYS0 192 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 DHCR7Q9UBM7 475 aaKnown RBP10.36□□□□□ -0.75
CCDC12-203ENST00000446836 NDOR1Q9UHB4 597 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 SNX6Q9UNH7 406 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 PADI2Q9Y2J8 665 aa10.36□□□□□ -0.75
CCDC12-203ENST00000446836 APC2O95996 2303 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 SEC16AO15027 2179 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 TMEM120BA0PK00 339 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 LRIT2A6NDA9 550 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 FOXE1O00358 373 aaPredicted RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 KLK10O43240 276 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 NSA2O95478 260 aaKnown RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 RECKO95980 971 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 KRT6AP02538 564 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 KRT6BP04259 564 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 PCNAP12004 261 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 ALOX12P18054 663 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 PTX3P26022 381 aaPredicted RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 ALDH3A1P30838 453 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 KRT6CP48668 564 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 RPS15P62841 145 aaKnown RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 IFT88Q13099 833 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 DSG2Q14126 1118 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 ZRSR2Q15696 482 aaKnown RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 CPSF6Q16630 551 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 ADPRMQ3LIE5 342 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 NKAIN1Q4KMZ8 207 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 FRG2Q64ET8 278 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 TTC19Q6DKK2 380 aaPredicted RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 CHSY3Q70JA7 882 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 NUDCD3Q8IVD9 361 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 KIRREL3Q8IZU9 778 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 AFAP1L2Q8N4X5 818 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 ZNF473Q8WTR7 871 aaKnown RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 GAL3ST3Q96A11 431 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 FRG2BQ96QU4 278 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 GATA5Q9BWX5 397 aaPredicted RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 ROGDIQ9GZN7 287 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 CHST8Q9H2A9 424 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 SLC26A1Q9H2B4 701 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 ELOVL6Q9H5J4 265 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 GPN2Q9H9Y4 310 aaPredicted RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 EML4Q9HC35 981 aaKnown RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 ZNF304Q9HCX3 659 aa10.35□□□□□ -0.75
CCDC12-203ENST00000446836 IFT80Q9P2H3 777 aaPredicted RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 GPN3Q9UHW5 284 aaPredicted RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 NXT1Q9UKK6 140 aaKnown RBP10.35□□□□□ -0.75
CCDC12-203ENST00000446836 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms