RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 HKDC1Q2TB90 917 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 SPDYAQ5MJ70 313 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 DEPDC1Q5TB30 811 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 FOXR1Q6PIV2 292 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 TRIM46Q7Z4K8 759 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 KCT2Q8NC54 265 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 LIN37Q96GY3 246 aaPredicted RBP16.6■□□□□ 0.25
SGCE-206ENST00000445866 ZNF285Q96NJ3 590 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 SERPINI1Q99574 410 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 KLHL31Q9H511 634 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 BRF2Q9HAW0 419 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 NMRK1Q9NWW6 199 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 SIDT1Q9NXL6 827 aaKnown RBP16.6■□□□□ 0.25
SGCE-206ENST00000445866 SLC39A1Q9NY26 324 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 VPS29Q9UBQ0 182 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 RARRES3Q9UL19 164 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 USH1CQ9Y6N9 552 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 CFAP54Q96N23 3096 aa16.6■□□□□ 0.25
SGCE-206ENST00000445866 SERTM1A2A2V5 107 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 SAP18O00422 153 aaKnown RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 ZSCAN9O15535 394 aaPredicted RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 P2RX6O15547 441 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 RGS14O43566 566 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 TGDSO95455 350 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 TBX6O95947 436 aaPredicted RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 HK2P52789 917 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 STXBP1P61764 594 aaKnown RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 SF3A3Q12874 501 aaKnown RBP eCLIP16.59■□□□□ 0.25
SGCE-206ENST00000445866 COL9A2Q14055 689 aaPredicted RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 IL11RAQ14626 422 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 DGLUCYQ7Z3D6 616 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 MARCH9Q86YJ5 346 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 GALNT15Q8N3T1 639 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 OR8K5Q8NH50 307 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 NT5CQ8TCD5 201 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 C19orf60Q96EN9 201 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 CENPKQ9BS16 269 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 MS4A8Q9BY19 250 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 TRIM55Q9BYV6 548 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 REXO4Q9GZR2 422 aaKnown RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 FBXO8Q9NRD0 319 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 CCDC187A0A096LP49 1063 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 ATP6AP2A0A1C7CYW4 349 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 URADA6NGE7 173 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 TRPC5OSA6NMA1 111 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 ATP6AP2O75787 350 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 JUNP05412 331 aaKnown RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 JMJD7P0C870 316 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 TROVE2P10155 538 aaKnown RBP eCLIP16.59■□□□□ 0.25
SGCE-206ENST00000445866 HSD3B1P14060 373 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 HSD3B2P26439 372 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 CSTF3Q12996 717 aaKnown RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 PUM1Q14671 1186 aaKnown RBP eCLIP16.59■□□□□ 0.25
SGCE-206ENST00000445866 GRM7Q14831 915 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 PRTGQ2VWP7 1150 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 TMEM35AQ53FP2 167 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 TOR1AIP1Q5JTV8 583 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 VWA5B1Q5TIE3 1220 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 KHDRBS2Q5VWX1 349 aaKnown RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 CYB5D1Q6P9G0 228 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 Q6ZSR9 355 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 CPLX4Q7Z7G2 160 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 BPHLQ86WA6 291 aaPredicted RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 PPP1R3BQ86XI6 285 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 BMPERQ8N8U9 685 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 WDR36Q8NI36 951 aaKnown RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 C3orf30Q96M34 536 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 CTRCQ99895 268 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 ACPTQ9BZG2 426 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 FAM107BQ9H098 131 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 APMAPQ9HDC9 416 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 NPHS2Q9NP85 383 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 DCTN4Q9UJW0 460 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 RUVBL1Q9Y265 456 aaKnown RBP16.59■□□□□ 0.25
SGCE-206ENST00000445866 RP1P56715 2156 aa16.59■□□□□ 0.25
SGCE-206ENST00000445866 HYKKA2RU49 373 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 B4E171 279 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 PLD2O14939 933 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 ETHE1O95571 254 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 ITIH1P19827 911 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 HNRNPH1P31943 449 aaKnown RBP16.58■□□□□ 0.24
SGCE-206ENST00000445866 TSPAN7P41732 249 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 MAPK10P53779 464 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 PLA2G16P53816 162 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 AQP5P55064 265 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 HYAL2Q12891 473 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 EIF3IQ13347 325 aaKnown RBP16.58■□□□□ 0.24
SGCE-206ENST00000445866 FAM214AQ32MH5 1076 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 PRAMEF17Q5VTA0 474 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 TLDC1Q6P9B6 456 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 TMPRSS7Q7RTY8 843 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 TTC29Q8NA56 475 aaPredicted RBP16.58■□□□□ 0.24
SGCE-206ENST00000445866 RGMAQ96B86 450 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 SLC6A16Q9GZN6 736 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 RIC8BQ9NVN3 520 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 AHSPQ9NZD4 102 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 PISDQ9UG56 409 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 PPT2Q9UMR5 302 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 PIEZO1Q92508 2521 aa16.58■□□□□ 0.24
SGCE-206ENST00000445866 CEP250Q9BV73 2442 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms