RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 CNOT3O75175 753 aaKnown RBP22.74■■□□□ 1.23
C9orf3-207ENST00000445181 EPB42P16452 691 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 KRT15P19012 456 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 IRF8Q02556 426 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 DSG2Q14126 1118 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 NKG7Q16617 165 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 TMIGD1Q6UXZ0 262 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 SHISA6Q6ZSJ9 500 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 OR9A4Q8NGU2 314 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 EPS8L3Q8TE67 593 aaKnown RBP22.74■■□□□ 1.23
C9orf3-207ENST00000445181 MOCOSQ96EN8 888 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 PTCD3Q96EY7 689 aaKnown RBP22.74■■□□□ 1.23
C9orf3-207ENST00000445181 TRIM4Q9C037 500 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 SLC26A1Q9H2B4 701 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 MRPL46Q9H2W6 279 aaKnown RBP22.74■■□□□ 1.23
C9orf3-207ENST00000445181 EHD1Q9H4M9 534 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 SOX17Q9H6I2 414 aaPredicted RBP22.74■■□□□ 1.23
C9orf3-207ENST00000445181 ANKHQ9HCJ1 492 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 TRPC4Q9UBN4 977 aa22.74■■□□□ 1.23
C9orf3-207ENST00000445181 NXT1Q9UKK6 140 aaKnown RBP22.74■■□□□ 1.23
C9orf3-207ENST00000445181 TNPO3Q9Y5L0 923 aaKnown RBP22.74■■□□□ 1.23
C9orf3-207ENST00000445181 KLK8O60259 260 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 PYGBP11216 843 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 IL1RNP18510 177 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 IFFO1Q0D2I5 559 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 CHIT1Q13231 466 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 DOC2AQ14183 400 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 SSPNQ14714 243 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 HIST2H2ACQ16777 129 aaPredicted RBP22.73■■□□□ 1.23
C9orf3-207ENST00000445181 PAGE2BQ5JRK9 111 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 HIST2H2AA3Q6FI13 130 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.73■■□□□ 1.23
C9orf3-207ENST00000445181 PTGR2Q8N8N7 351 aaPredicted RBP22.73■■□□□ 1.23
C9orf3-207ENST00000445181 TTLQ8NG68 377 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 NT5CQ8TCD5 201 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 ACMSDQ8TDX5 336 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 CCT6BQ92526 530 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 CAVIN3Q969G5 261 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 MIEF2Q96C03 454 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 PHF21BQ96EK2 531 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 EFCAB11Q9BUY7 163 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 PITHD1Q9GZP4 211 aaPredicted RBP22.73■■□□□ 1.23
C9orf3-207ENST00000445181 CCDC88CQ9P219 2028 aa22.73■■□□□ 1.23
C9orf3-207ENST00000445181 URADA6NGE7 173 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 FFAR3O14843 346 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 GPR42O15529 346 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 NSA2O95478 260 aaKnown RBP22.72■■□□□ 1.23
C9orf3-207ENST00000445181 HNF4AP41235 474 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 LAPTM5Q13571 262 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 HERC3Q15034 1050 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 ABHD13Q7L211 337 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 PRSS41Q7RTY9 318 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 LCA5Q86VQ0 697 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 TDRPQ86YL5 185 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 PRSS58Q8IYP2 241 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 OR2W6PQ8NHA6 318 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 STT3BQ8TCJ2 826 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 ADAMTS17Q8TE56 1095 aa22.72■■□□□ 1.23
C9orf3-207ENST00000445181 TLDC2A0PJX2 215 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 ANKDD1BA6NHY2 528 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 H0YIG0 161 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 SGK494L7N484 410 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 CDH16O75309 829 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 SIX3O95343 332 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-207ENST00000445181 EPORP19235 508 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 SNRPNP63162 240 aaKnown RBP22.71■■□□□ 1.23
C9orf3-207ENST00000445181 NAA30Q147X3 362 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-207ENST00000445181 PCBP2Q15366 365 aaKnown RBP eCLIP22.71■■□□□ 1.232e-6■■■□□ 15.6
C9orf3-207ENST00000445181 AMER3Q8N944 861 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 MZB1Q8WU39 189 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 WDR34Q96EX3 536 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 SPSB2Q99619 263 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 NT5DC2Q9H857 520 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 MKKSQ9NPJ1 570 aaPredicted RBP22.71■■□□□ 1.23
C9orf3-207ENST00000445181 NAALAD2Q9Y3Q0 740 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 MAP4K5Q9Y4K4 846 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 SLC22A7Q9Y694 548 aa22.71■■□□□ 1.23
C9orf3-207ENST00000445181 SPTA1P02549 2419 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 A0A1W2PPM1 405 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 LRRC14BA6NHZ5 514 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 ARGFXA6NJG6 315 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 VSTM2BA6NLU5 285 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 PRAMEF4O60810 478 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 WISP1O95388 367 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 UMODP07911 640 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 ZGLP1P0C6A0 271 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 ZNF888P0CJ79 500 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-207ENST00000445181 GSTM2P28161 218 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 EEF1DP29692 281 aaKnown RBP22.7■■□□□ 1.22
C9orf3-207ENST00000445181 PIK3CGP48736 1102 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 SKP1P63208 163 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 MAT1AQ00266 395 aaKnown RBP22.7■■□□□ 1.22
C9orf3-207ENST00000445181 GTF2H2Q13888 395 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 TBCCQ15814 346 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 SYT16Q17RD7 645 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 LACTB2Q53H82 288 aaPredicted RBP22.7■■□□□ 1.22
C9orf3-207ENST00000445181 VWA2Q5GFL6 755 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 PRAMEF9Q5VWM5 478 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 GTF2H2CQ6P1K8 395 aa22.7■■□□□ 1.22
C9orf3-207ENST00000445181 MYLK4Q86YV6 388 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms