RNA–Protein interactions for RNA: ENST00000445153.1

SMARCAL1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 5

Gene SMARCAL1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-210ENST00000445153 ASPGQ86U10 573 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 ZNF227Q86WZ6 799 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 SPPL2CQ8IUH8 684 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 IGDCC3Q8IVU1 814 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 SIAH3Q8IW03 269 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 KIF2BQ8N4N8 673 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 CAMKVQ8NCB2 501 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 MCOLN3Q8TDD5 553 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 THAP3Q8WTV1 239 aaPredicted RBP13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 ALKBH8Q96BT7 664 aaKnown RBP13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 THAP11Q96EK4 314 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 PBKQ96KB5 322 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 FRMD6Q96NE9 622 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 NDNQ99608 321 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 UTP23Q9BRU9 249 aaKnown RBP13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 RUBCNLQ9H714 662 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 ANKHQ9HCJ1 492 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 CHST11Q9NPF2 352 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 C20orf96Q9NUD7 363 aaPredicted RBP13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 C19orf25Q9UFG5 118 aaPredicted RBP13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 NPIPA1Q9UND3 350 aa13.33□□□□□ -0.28
SMARCAL1-210ENST00000445153 CTAGE15A4D2H0 777 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 USP27XA6NNY8 438 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 GABRR3A8MPY1 467 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 PGRMC1O00264 195 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 FANCGO15287 622 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 SP1P08047 785 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 MYBL2P10244 700 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 CDH1P12830 882 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 COX6B1P14854 86 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 SLC26A5P58743 744 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 OLR1P78380 273 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 SARNPP82979 210 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 ALDH6A1Q02252 535 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 USP10Q14694 798 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 ABRAXAS2Q15018 415 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 EXT1Q16394 746 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 HSP90AA5PQ58FG0 334 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 ARMC3Q5W041 872 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 MTFR2Q6P444 385 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 GDF7Q7Z4P5 450 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 FGD2Q7Z6J4 655 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 CTAGE6Q86UF2 777 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 C17orf64Q86WR6 236 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 AFAP1L2Q8N4X5 818 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 MFSD9Q8NBP5 474 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 ZNF740Q8NDX6 193 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 ELP5Q8TE02 316 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 PWWP2AQ96N64 755 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 TRIM51Q9BSJ1 452 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 SGPP1Q9BX95 441 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 DDX47Q9H0S4 455 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 CCDC68Q9H2F9 335 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 SPNS1Q9H2V7 528 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 CDCP1Q9H5V8 836 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 XAB2Q9HCS7 855 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 IARS2Q9NSE4 1012 aaKnown RBP13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 MEMO1Q9Y316 297 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 SLC22A7Q9Y694 548 aa13.32□□□□□ -0.28
SMARCAL1-210ENST00000445153 DCHS2Q6V1P9 2916 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 MAGEB17A8MXT2 336 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 ADAM10O14672 748 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 ASNA1O43681 348 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 ESRRAP11474 423 aaPredicted RBP13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 IVDP26440 423 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 EEF1DP29692 281 aaKnown RBP13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 CDKN2DP55273 166 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 OC90Q02509 493 aaPredicted RBP13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 ACTN3Q08043 901 aaPredicted RBP13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 KRTCAP3Q53RY4 240 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 RBM20Q5T481 1227 aaKnown RBP13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 SLC25A25Q6KCM7 469 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 PAQR3Q6TCH7 311 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 LCTLQ6UWM7 567 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 C3P1Q6ZMU1 363 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 ACTRT1Q8TDG2 376 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 PYCR2Q96C36 320 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 OR4K3Q96R72 315 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 LPAR4Q99677 370 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 PARVBQ9HBI1 364 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 ASB1Q9Y576 335 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 MAD1L1Q9Y6D9 718 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 COMMD10Q9Y6G5 202 aa13.31□□□□□ -0.28
SMARCAL1-210ENST00000445153 POLQO75417 2590 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 ANKRD17O75179 2603 aaKnown RBP13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 F8P00451 2351 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 EIF3FO00303 357 aaPredicted RBP13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 TP73O15350 636 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 CHST10O43529 356 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 GALR3O60755 368 aaPredicted RBP13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 CLDN14O95500 239 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 TSPAN12O95859 305 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 CD46P15529 392 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 AGAP20933 346 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 CASP6P55212 293 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 OR4D2P58180 307 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 BTG2P78543 158 aa13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 DHX9Q08211 1270 aaKnown RBP13.3□□□□□ -0.28
SMARCAL1-210ENST00000445153 CRYMQ14894 314 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms