RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 SLC28A1O00337 649 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 NDUFS4O43181 175 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 MAP3K7O43318 606 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 SNX3O60493 162 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 ATP6AP2O75787 350 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 RSL1D1O76021 490 aaKnown RBP14.41□□□□□ -0.1
CCNE1-203ENST00000444983 TGFB1P01137 390 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 TROVE2P10155 538 aaKnown RBP eCLIP14.41□□□□□ -0.1
CCNE1-203ENST00000444983 EPHA3P29320 983 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 HNRNPH1P31943 449 aaKnown RBP14.41□□□□□ -0.1
CCNE1-203ENST00000444983 GCGRP47871 477 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 CYP4F2P78329 520 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 SIM1P81133 766 aaPredicted RBP14.41□□□□□ -0.1
CCNE1-203ENST00000444983 HMGCS1Q01581 520 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 TBL3Q12788 808 aaKnown RBP14.41□□□□□ -0.1
CCNE1-203ENST00000444983 TUBB3Q13509 450 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 HKDC1Q2TB90 917 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 PRTGQ2VWP7 1150 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 TMTC4Q5T4D3 741 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 PHF19Q5T6S3 580 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 KHDRBS2Q5VWX1 349 aaKnown RBP14.41□□□□□ -0.1
CCNE1-203ENST00000444983 CPLX4Q7Z7G2 160 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 CACTIN-AS1Q8N1I8 211 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 RERGQ96A58 199 aaPredicted RBP14.41□□□□□ -0.1
CCNE1-203ENST00000444983 MS4A6EQ96DS6 147 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 ZNF717Q9BY31 904 aaPredicted RBP14.41□□□□□ -0.1
CCNE1-203ENST00000444983 OR51B5Q9H339 312 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 WDR55Q9H6Y2 383 aaPredicted RBP14.41□□□□□ -0.1
CCNE1-203ENST00000444983 PFDN4Q9NQP4 134 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 VPS29Q9UBQ0 182 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 DCTN4Q9UJW0 460 aa14.41□□□□□ -0.1
CCNE1-203ENST00000444983 KIF26BQ2KJY2 2108 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 RGS14O43566 566 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 KCNK5O95279 499 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 MT-CO3P00414 261 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 SMIM10L1P0DMW3 83 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 ARL4DP49703 201 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 ARFIP1P53367 373 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 VSX2P58304 361 aaPredicted RBP14.4□□□□□ -0.1
CCNE1-203ENST00000444983 SNRPNP63162 240 aaKnown RBP14.4□□□□□ -0.1
CCNE1-203ENST00000444983 PHEXP78562 749 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 GPR19Q15760 415 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 CCDC157Q569K6 752 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 WASHC2DQ5SRD0 308 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 UBE3DQ7Z6J8 389 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 KCT2Q8NC54 265 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 CAMKVQ8NCB2 501 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 AGBL5Q8NDL9 886 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 ACTRT2Q8TDY3 377 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 CHTF18Q8WVB6 975 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 C10orf82Q8WW14 230 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 SMIM10Q96HG1 83 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 METTL2AQ96IZ6 378 aaKnown RBP14.4□□□□□ -0.1
CCNE1-203ENST00000444983 PPP1R36Q96LQ0 422 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 OR52B2Q96RD2 323 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 SERPINI1Q99574 410 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 ELAC2Q9BQ52 826 aaKnown RBP14.4□□□□□ -0.1
CCNE1-203ENST00000444983 NSRP1Q9H0G5 558 aaKnown RBP14.4□□□□□ -0.1
CCNE1-203ENST00000444983 KLHL31Q9H511 634 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 AKTIPQ9H8T0 292 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 LHX9Q9NQ69 397 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 FGF21Q9NSA1 209 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 SIRT5Q9NXA8 310 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 CDV3Q9UKY7 258 aaKnown RBP14.4□□□□□ -0.1
CCNE1-203ENST00000444983 APOBEC2Q9Y235 224 aaKnown RBP14.4□□□□□ -0.1
CCNE1-203ENST00000444983 WDFY3Q8IZQ1 3526 aa14.4□□□□□ -0.1
CCNE1-203ENST00000444983 KNTC1P50748 2209 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 A0A0G2JND7 137 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 C4orf51C9J302 202 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 TMX2-CTNND1H3BSU7 103 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 ZSCAN9O15535 394 aaPredicted RBP14.39□□□□□ -0.11
CCNE1-203ENST00000444983 SEMA3DO95025 777 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 STATHP02808 62 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 SLC35G6P0C7Q6 338 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 NOVA1P51513 510 aaKnown RBP14.39□□□□□ -0.11
CCNE1-203ENST00000444983 EMP3P54852 163 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 CLDN6P56747 220 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 TMEM35AQ53FP2 167 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 TCTE1Q5JU00 501 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 C6orf136Q5SQH8 315 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 HES3Q5TGS1 186 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 TMEM214Q6NUQ4 689 aaKnown RBP14.39□□□□□ -0.11
CCNE1-203ENST00000444983 CHSY3Q70JA7 882 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 DGLUCYQ7Z3D6 616 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 SPATA21Q7Z572 469 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 CSNK1A1LQ8N752 337 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 OR1L3Q8NH93 324 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 APIPQ96GX9 242 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 LIN37Q96GY3 246 aaPredicted RBP14.39□□□□□ -0.11
CCNE1-203ENST00000444983 F2RL3Q96RI0 385 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 REXO4Q9GZR2 422 aaKnown RBP14.39□□□□□ -0.11
CCNE1-203ENST00000444983 FAM107BQ9H098 131 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 OCIAD1Q9NX40 245 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 SLC12A4Q9UP95 1085 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 CLCA2Q9UQC9 943 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 RUVBL1Q9Y265 456 aaKnown RBP14.39□□□□□ -0.11
CCNE1-203ENST00000444983 GOLGA8QA0A0J9YX86 632 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 GOLGA8OA6NCC3 632 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 GOLGA8NF8WBI6 632 aa14.39□□□□□ -0.11
CCNE1-203ENST00000444983 PLPP1O14494 284 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms