RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 CCL4P13236 92 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 SERPINB3P29508 390 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 SERPINB5P36952 375 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 CASP2P42575 452 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 FOXA1P55317 472 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 RPS15AP62244 130 aaKnown RBP16.44■□□□□ 0.22
LIME1-202ENST00000444951 TUBB3Q13509 450 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 TCHHL1Q5QJ38 904 aaPredicted RBP16.44■□□□□ 0.22
LIME1-202ENST00000444951 SH2D4BQ5SQS7 431 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 CLEC6AQ6EIG7 209 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 RNF44Q7L0R7 432 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 ZNF605Q86T29 641 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.44■□□□□ 0.22
LIME1-202ENST00000444951 RNF175Q8N4F7 328 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 ANKRD53Q8N9V6 530 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 MFSD9Q8NBP5 474 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 RAB3IL1Q8TBN0 382 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 RERGQ96A58 199 aaPredicted RBP16.44■□□□□ 0.22
LIME1-202ENST00000444951 CMKLR1Q99788 373 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 CTRCQ99895 268 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 WDR70Q9NW82 654 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 PISDQ9UG56 409 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 TRPS1Q9UHF7 1281 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 PILRAQ9UKJ1 303 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 ZNF490Q9ULM2 529 aaPredicted RBP16.44■□□□□ 0.22
LIME1-202ENST00000444951 PLCL2Q9UPR0 1127 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 PCDHGA4Q9Y5G9 962 aa16.44■□□□□ 0.22
LIME1-202ENST00000444951 KCNE1BA0A087WTH5 132 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 ANKDD1BA6NHY2 528 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 H0YGG7 62 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 UGDHO60701 494 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 SCTRP47872 440 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 NEK2P51955 445 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 MAPK10P53779 464 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 ARF3P61204 181 aaPredicted RBP16.43■□□□□ 0.22
LIME1-202ENST00000444951 SCIMPQ6UWF3 145 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 OR7G3Q8NG95 312 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 UBE2E3Q969T4 207 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 WBP1Q96G27 269 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 MAGEB18Q96M61 343 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 MTERF1Q99551 399 aaKnown RBP16.43■□□□□ 0.22
LIME1-202ENST00000444951 SPRTNQ9H040 489 aaPredicted RBP16.43■□□□□ 0.22
LIME1-202ENST00000444951 ELOVL6Q9H5J4 265 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 FANCEQ9HB96 536 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 FGF21Q9NSA1 209 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 PCDHGA7Q9Y5G6 932 aa16.43■□□□□ 0.22
LIME1-202ENST00000444951 PYCARD-AS1I3L0S3 204 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 MANBAO00462 879 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 AZIN1O14977 448 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 NDUFS4O43181 175 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 ENO1P06733 434 aaKnown RBP16.42■□□□□ 0.22
LIME1-202ENST00000444951 JMJD7P0C870 316 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 ATXN8OSP0DMR3 200 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 MDH1P40925 334 aaKnown RBP16.42■□□□□ 0.22
LIME1-202ENST00000444951 GABRA4P48169 554 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 ACY1Q03154 408 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 PCDH1Q08174 1060 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 IFT88Q13099 833 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 GGTA1PQ4G0N0 100 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 WASHC2DQ5SRD0 308 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 CCDC81Q6ZN84 652 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 FAM47EQ6ZV65 393 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 CSNK1A1LQ8N752 337 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 ZNF781Q8N8C0 355 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 OR1L3Q8NH93 324 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 REPS1Q96D71 796 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 MAGEB10Q96LZ2 347 aaPredicted RBP16.42■□□□□ 0.22
LIME1-202ENST00000444951 OR2A5Q96R48 311 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 HBEGFQ99075 208 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 SORT1Q99523 831 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 SLC29A3Q9BZD2 475 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 ILKAPQ9H0C8 392 aaPredicted RBP16.42■□□□□ 0.22
LIME1-202ENST00000444951 APMAPQ9HDC9 416 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 FARSBQ9NSD9 589 aaKnown RBP16.42■□□□□ 0.22
LIME1-202ENST00000444951 PNPOQ9NVS9 261 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 THAP1Q9NVV9 213 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 SLC39A1Q9NY26 324 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 FOXJ2Q9P0K8 574 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 ZDHHC2Q9UIJ5 367 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 SNX6Q9UNH7 406 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 TRAF6Q9Y4K3 522 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 PCDHGA11Q9Y5H2 935 aa16.42■□□□□ 0.22
LIME1-202ENST00000444951 TCP11X1B4DZS4 312 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 H0YIV9 168 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 P2RX6O15547 441 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 SNNO75324 88 aaPredicted RBP16.41■□□□□ 0.22
LIME1-202ENST00000444951 OR2B3O76000 313 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 PDYNP01213 254 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 KRT6AP02538 564 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 KRT6BP04259 564 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 KITP10721 976 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 KRT6CP48668 564 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 HTR6P50406 440 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 EIF3IQ13347 325 aaKnown RBP16.41■□□□□ 0.22
LIME1-202ENST00000444951 E2F2Q14209 437 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 HKDC1Q2TB90 917 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 FRG2Q64ET8 278 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 VN1R4Q7Z5H5 301 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 ASPGQ86U10 573 aa16.41■□□□□ 0.22
LIME1-202ENST00000444951 LAS2Q8IYD9 372 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms