RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 MICAQ29983 383 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 IGSF11Q5DX21 431 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 GOLGA7Q7Z5G4 137 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 TINF2Q9BSI4 451 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 TRAF4Q9BUZ4 470 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.85□□□□□ -1.63
HERC1-201ENST00000443617 DNMT3AQ9Y6K1 912 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 RGPD2P0DJD1 1756 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 A0A1B0GVM2 712 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 HAS3O00219 553 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PCDH17O14917 1159 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 GMDSO60547 372 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SCG5P05408 212 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 MMP10P09238 476 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 CLEC2LP0C7M8 214 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SSTR2P30874 369 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 S100A12P80511 92 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 ZNF33BQ06732 778 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 C2orf80Q0P641 193 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SPDYE7PQ495Y7 208 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 XKR7Q5GH72 579 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 FAHD1Q6P587 224 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PITX2Q99697 317 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 YJEFN3A6XGL0 299 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 MLLT6P55198 1093 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 ERVPABLB-1P60509 514 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 TTLL4Q14679 1199 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 EXOC3L2Q2M3D2 409 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 GTDC1Q4AE62 458 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 LAX1Q8IWV1 398 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 TOP6BLQ8N6T0 577 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 AGBL3Q8NEM8 1001 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 TSSK3Q96PN8 268 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 POLR2J2Q9GZM3 115 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 SPNS1Q9H2V7 528 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 FKBP7Q9Y680 259 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 CLIC1O00299 241 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PPEF2O14830 753 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 STK16O75716 305 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 YBX1P67809 324 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 TEX261Q6UWH6 196 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 TMC8Q8IU68 726 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 NT5C3BQ969T7 300 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 KIAA1143Q96AT1 154 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 CINPQ9BW66 212 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 ZNF175Q9Y473 711 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 U3KQ87 197 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 ECM29Q5VYK3 1845 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 STAU1O95793 577 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 TGM6O95932 706 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 XKP51811 444 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SHEQ5VZ18 495 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SPAG16Q8N0X2 631 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 OR4K2Q8NGD2 314 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SH3KBP1Q96B97 665 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 NXPE2Q96DL1 559 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SLC39A1Q9NY26 324 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 NKIRAS2Q9NYR9 191 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 FLRT1Q9NZU1 646 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 UXTQ9UBK9 157 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 AFF4Q9UHB7 1163 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 RIPK3Q9Y572 518 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 KRBOX1C9JBD0 128 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 TSPAN3O60637 253 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 PLATP00750 562 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 TRBC1P01850 177 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 FCER2P06734 321 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 BCKDHAP12694 445 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 FGFBP1Q14512 234 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SF3A2Q15428 464 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 GEMIN6Q8WXD5 167 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 SDHCQ99643 169 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 PPIEQ9UNP9 301 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 KLRG2A4D1S0 409 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 ENTPD6O75354 484 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SLC10A3P09131 477 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 POU3F3P20264 500 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 LHX1P48742 406 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 DEFA5Q01523 94 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 LAMTOR1Q6IAA8 161 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 APH1BQ8WW43 257 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 MCCC1Q96RQ3 725 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 CPPED1Q9BRF8 314 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 NSUN3Q9H649 340 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 OR1I1O60431 355 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 MMP20O60882 483 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 APOC3P02656 99 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 VSX2P58304 361 aaPredicted RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 HKDC1Q2TB90 917 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 DALRD3Q5D0E6 543 aaKnown RBP4.85□□□□□ -1.63
HERC1-201ENST00000443617 ATAT1Q5SQI0 421 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 CALHM3Q86XJ0 350 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 OR8K3Q8NH51 312 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 KLHL5Q96PQ7 755 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 COPS8Q99627 209 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 GSX2Q9BZM3 304 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 KLHL31Q9H511 634 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 FBXO10Q9UK96 956 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 M0R129 80 aa4.85□□□□□ -1.63
HERC1-201ENST00000443617 SLC19A2O60779 497 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms