RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 FAM53BQ14153 422 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 E2F2Q14209 437 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 NCF4Q15080 339 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 LIPJQ5W064 366 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ZYG11AQ6WRX3 759 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 OVCH1Q7RTY7 1134 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 CROCCP2Q86T23 111 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 MYLK4Q86YV6 388 aaPredicted RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.72□□□□□ -0.53
USP1-203ENST00000442679 MYRIPQ8NFW9 859 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 OR9A4Q8NGU2 314 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ZCCHC10Q8TBK6 192 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 PPP4R1Q8TF05 950 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ZNF483Q8TF39 744 aaPredicted RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 STARD8Q92502 1023 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 MVB12AQ96EY5 273 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 APOPT1Q96IL0 206 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 SEC16BQ96JE7 1060 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 NSUN5Q96P11 429 aaKnown RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 SMC6Q96SB8 1091 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 C1QTNF3Q9BXJ4 246 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ERVK-6Q9BXR3 956 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 IQCGQ9H095 443 aaKnown RBP11.72□□□□□ -0.53
USP1-203ENST00000442679 RHBGQ9H310 441 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 PRORYQ9H606 182 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ANKHQ9HCJ1 492 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 PRM3Q9NNZ6 103 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 MKS1Q9NXB0 559 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 PLLPQ9Y342 182 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 SLC22A7Q9Y694 548 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ACACAQ13085 2346 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ANKRD12Q6UB98 2062 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 ITPR1Q14643 2758 aa11.72□□□□□ -0.53
USP1-203ENST00000442679 EPG5Q9HCE0 2579 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 PRPF4O43172 522 aaKnown RBP eCLIP11.71□□□□□ -0.53
USP1-203ENST00000442679 CLEC3AO75596 197 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 CREG1O75629 220 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 SUPT7LO94864 414 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 CLDN9O95484 217 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 SERPINA6P08185 405 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 PCNAP12004 261 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 CPA3P15088 417 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 ARL1P40616 181 aaPredicted RBP11.71□□□□□ -0.53
USP1-203ENST00000442679 HNF4AP41235 474 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 CCNG1P51959 295 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 CDH13P55290 713 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 HERC3Q15034 1050 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 RBBP7Q16576 425 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 UNC50Q53HI1 259 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 TOR1AIP1Q5JTV8 583 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 ZNF678Q5SXM1 525 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 GRHL2Q6ISB3 625 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 MRPL14Q6P1L8 145 aaKnown RBP11.71□□□□□ -0.53
USP1-203ENST00000442679 MED27Q6P2C8 311 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 RPS27LQ71UM5 84 aaKnown RBP11.71□□□□□ -0.53
USP1-203ENST00000442679 COX15Q7KZN9 410 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 LAS2Q8IYD9 372 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 L3MBTL4Q8NA19 623 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 RDH11Q8TC12 318 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 CCT6BQ92526 530 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 FKBP10Q96AY3 582 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 CCDC126Q96EE4 140 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 TMEM237Q96Q45 408 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 YIPF2Q9BWQ6 316 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 SLC6A16Q9GZN6 736 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 KLHL31Q9H511 634 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 ZBTB26Q9HCK0 441 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 SEMA4BQ9NPR2 832 aaPredicted RBP11.71□□□□□ -0.53
USP1-203ENST00000442679 ACSS2Q9NR19 701 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 SENP1Q9P0U3 644 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 TCFL5Q9UL49 500 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 PADI2Q9Y2J8 665 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 RNF11Q9Y3C5 154 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 NAALAD2Q9Y3Q0 740 aa11.71□□□□□ -0.53
USP1-203ENST00000442679 AHCTF1Q8WYP5 2266 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 LRIT2A6NDA9 550 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 URADA6NGE7 173 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 H0YIG0 161 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 SGK494L7N484 410 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 UGDHO60701 494 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 CNOT3O75175 753 aaKnown RBP11.7□□□□□ -0.54
USP1-203ENST00000442679 KLF7O75840 302 aaPredicted RBP11.7□□□□□ -0.54
USP1-203ENST00000442679 NSA2O95478 260 aaKnown RBP11.7□□□□□ -0.54
USP1-203ENST00000442679 ALBP02768 609 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 ZNF888P0CJ79 500 aaPredicted RBP11.7□□□□□ -0.54
USP1-203ENST00000442679 PRKAR1AP10644 381 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 CREB1P16220 341 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 ALOX12P18054 663 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 IL1RNP18510 177 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 TSPAN8P19075 237 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 RAB8AP61006 207 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 STXBP1P61764 594 aaKnown RBP11.7□□□□□ -0.54
USP1-203ENST00000442679 CLCQ05315 142 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 HYAL2Q12891 473 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 DSG2Q14126 1118 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 ERV3-1Q14264 604 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 CASP8Q14790 479 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 CPSF6Q16630 551 aaKnown RBP eCLIP11.7□□□□□ -0.54
USP1-203ENST00000442679 FAM69BQ5VUD6 431 aa11.7□□□□□ -0.54
USP1-203ENST00000442679 ADNP2Q6IQ32 1131 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms