RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 LYPLAL1Q5VWZ2 237 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CPZQ66K79 652 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 MRNIPQ6NTE8 343 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 XKRXQ6PP77 449 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 TMEM207Q6UWW9 146 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 C6orf15Q6UXA7 325 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 TIFABQ6ZNK6 161 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CDHR3Q6ZTQ4 885 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 TAS2R42Q7RTR8 314 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 GALNT7Q86SF2 657 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SERPINA9Q86WD7 417 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CEP97Q8IW35 865 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 LMNTD2Q8IXW0 634 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 C4orf33Q8N1A6 199 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 TRAM1L1Q8N609 369 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 OTUD6BQ8N6M0 293 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 BMPERQ8N8U9 685 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 PLA2G15Q8NCC3 412 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 FAM46DQ8NEK8 389 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ZNF398Q8TD17 642 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CALML6Q8TD86 181 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 DTX3LQ8TDB6 740 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CXorf40AQ8TE69 158 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ITLN2Q8WWU7 325 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 NINJ1Q92982 152 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 RAB7BQ96AH8 199 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 AP2M1Q96CW1 435 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 NUS1Q96E22 293 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 BIRC8Q96P09 236 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 PLEKHG4BQ96PX9 1271 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 AARSD1Q9BTE6 412 aaKnown RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 RIOK2Q9BVS4 552 aaKnown RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SSBP3Q9BWW4 388 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 C1QTNF3Q9BXJ4 246 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ILKAPQ9H0C8 392 aaPredicted RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 C12orf65Q9H3J6 166 aaKnown RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ACBD3Q9H3P7 528 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 FAM83DQ9H4H8 585 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ASB8Q9H765 288 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 MED4Q9NPJ6 270 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 MBNL1Q9NR56 388 aaKnown RBP4.61□□□□□ -1.67
PTPN4-206ENST00000441089 DLL4Q9NR61 685 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SMOXQ9NWM0 555 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 GPR83Q9NYM4 423 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 PKD2L2Q9NZM6 624 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 C5AR2Q9P296 337 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 GALPQ9UBC7 116 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 CRYL1Q9Y2S2 319 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 PCDHGB6Q9Y5F9 930 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SLC30A1Q9Y6M5 507 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 PMF1-BGLAPU3KQ54 211 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 SPTBP11277 2137 aa4.61□□□□□ -1.67
PTPN4-206ENST00000441089 ANK2Q01484 3957 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 CHD3Q12873 2000 aaKnown RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 IGLV3-16A0A075B6K0 115 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 IQANK1A0A1B0GTG1 560 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 RGSL1A5PLK6 1076 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 GOLGA6L10A6NI86 522 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 ARGFXA6NJG6 315 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 IQCF5A8MTL0 148 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 FAM171A2A8MVW0 826 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 C21orf140B9A014 251 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 NEMP1O14524 444 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 PHGDHO43175 533 aaKnown RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 DNAJC6O75061 913 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 NIPSNAP2O75323 286 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 SPAG7O75391 227 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 NDUFS3O75489 264 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 TNFP01375 233 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 MT-ND3P03897 115 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 PCCBP05166 539 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 C2P06681 752 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 SLC35E2BP0CK96 405 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 BRAFP15056 766 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 KRT15P19012 456 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 KRT4P19013 534 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 ITGALP20701 1170 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 FDXRP22570 491 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 RPS3P23396 243 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 TACR1P25103 407 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 CNTFP26441 200 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 CD1CP29017 333 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 FMO4P31512 558 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 HPDP32754 393 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 SPRP35270 261 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 IGFALSP35858 605 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 OR1D5P58170 312 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 IRF9Q00978 393 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 DPTQ07507 201 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 FOXD4Q12950 439 aaPredicted RBP4.6□□□□□ -1.67
PTPN4-206ENST00000441089 DNASE1L3Q13609 305 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 ITIH4Q14624 930 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 NR1D2Q14995 579 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 IRF4Q15306 451 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 UGT8Q16880 541 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 DPY19L1Q2PZI1 675 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 GPRC6AQ5T6X5 926 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 ZDHHC20Q5W0Z9 365 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 TMEM71Q6P5X7 295 aa4.6□□□□□ -1.67
PTPN4-206ENST00000441089 CERS6Q6ZMG9 384 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms