RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 YIPF2Q9BWQ6 316 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 IPPKQ9H8X2 491 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 COPG2Q9UBF2 871 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 PTRH2Q9Y3E5 179 aaKnown RBP18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 NUP210LQ5VU65 1888 aa18.5■□□□□ 0.55
SEMA3B-206ENST00000439487 COPEO14579 308 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 DLX3O60479 287 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 ERLIN1O75477 346 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 KLF7O75840 302 aaPredicted RBP18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 CRHR1P34998 444 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 HNF4AP41235 474 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 AVPR1BP47901 424 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 CCT5P48643 541 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 RGS1Q08116 209 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 PCDH1Q08174 1060 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 ZNF844Q08AG5 666 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 HYAL2Q12891 473 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 IL10RAQ13651 578 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 E2F2Q14209 437 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 HIST2H2ACQ16777 129 aaPredicted RBP18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 KRT71Q3SY84 523 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 PAGE2BQ5JRK9 111 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 HIST2H2AA3Q6FI13 130 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 ADNP2Q6IQ32 1131 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 METTL2BQ6P1Q9 378 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 RPS27LQ71UM5 84 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 TTLQ8NG68 377 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 CCT6BQ92526 530 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 FKBP10Q96AY3 582 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 ZBTB9Q96C00 473 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 NSUN5Q96P11 429 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 FAM117AQ9C073 453 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 PITHD1Q9GZP4 211 aaPredicted RBP18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 C12orf65Q9H3J6 166 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 KLHL31Q9H511 634 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 NOL11Q9H8H0 719 aaKnown RBP18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 ACSS2Q9NR19 701 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 CTSFQ9UBX1 484 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 PCTPQ9UKL6 214 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 PADI2Q9Y2J8 665 aa18.49■□□□□ 0.55
SEMA3B-206ENST00000439487 PIEZO2Q9H5I5 2752 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 IGSF10Q6WRI0 2623 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 ATMQ13315 3056 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 ANKDD1BA6NHY2 528 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 B3GALT4O96024 378 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 ALBP02768 609 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 RPS17P08708 135 aaKnown RBP18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 ATP5F1P24539 256 aaPredicted RBP18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 PIK3CGP48736 1102 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 MAT1AQ00266 395 aaKnown RBP18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 NKG7Q16617 165 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 SYT16Q17RD7 645 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 CRTC2Q53ET0 693 aaPredicted RBP18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 TOR1AIP1Q5JTV8 583 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 VN1R5Q7Z5H4 357 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 MYLK4Q86YV6 388 aaPredicted RBP18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 SRRM1Q8IYB3 904 aaKnown RBP18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 IQCKQ8N0W5 287 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 AMER3Q8N944 861 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 ZIM3Q96PE6 472 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 SLC6A16Q9GZN6 736 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 AICDAQ9GZX7 198 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 SLC26A1Q9H2B4 701 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 ACTR8Q9H981 624 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 ANKHQ9HCJ1 492 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 ZBTB26Q9HCK0 441 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 GRID1Q9ULK0 1009 aa18.48■□□□□ 0.55
SEMA3B-206ENST00000439487 DOCK10Q96BY6 2186 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 CCDC151A5D8V7 595 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 SGK494L7N484 410 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 OR7A17O14581 309 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 PRPF4O43172 522 aaKnown RBP eCLIP18.47■□□□□ 0.556e-13■■□□□ 13.1
SEMA3B-206ENST00000439487 NSA2O95478 260 aaKnown RBP18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 RECKO95980 971 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 PROCP04070 461 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 SERPINA6P08185 405 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 CD63P08962 238 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 ZNF888P0CJ79 500 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 FOLR3P41439 243 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 DSG2Q14126 1118 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 UGT8Q16880 541 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 DEFB109BQ30KR1 87 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 GRHL2Q6ISB3 625 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 MED27Q6P2C8 311 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 SHISA6Q6ZSJ9 500 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 PDSS2Q86YH6 399 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 SHISA5Q8N114 240 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 AFAP1L2Q8N4X5 818 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 OR2Y1Q8NGV0 311 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 UTP15Q8TED0 518 aaKnown RBP18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 ZNF483Q8TF39 744 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 ATP6V1E2Q96A05 226 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 RHBGQ9H310 441 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 SOX17Q9H6I2 414 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 PRM3Q9NNZ6 103 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 SEMA4BQ9NPR2 832 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 TRPC4Q9UBN4 977 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 ZNF282Q9UDV7 671 aaPredicted RBP18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 NAALAD2Q9Y3Q0 740 aa18.47■□□□□ 0.55
SEMA3B-206ENST00000439487 SLC22A7Q9Y694 548 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms