RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 LHCGRP22888 699 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 ST13P50502 369 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 CLCN7P51798 805 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 RAB8AP61006 207 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF763Q0D2J5 394 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 EIF2B5Q13144 721 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF77Q15935 545 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 C7orf57Q8NEG2 295 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 PDLIM5Q96HC4 596 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 GPR78Q96P69 363 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 OR2M4Q96R27 311 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC38A3Q99624 504 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 GPATCH1Q9BRR8 931 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 SLC35A5Q9BS91 424 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 NUAK2Q9H093 628 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 C8orf4Q9NR00 106 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 FAM120CQ9NX05 1096 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 FZD4Q9ULV1 537 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 OR10H1Q9Y4A9 318 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 SBF1O95248 1867 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 H3BNC9 293 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 NDUFS4O43181 175 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 NPPAP01160 153 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 GNAO1P09471 354 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 IL12RB1P42701 662 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 TPTEP56180 551 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 RPS7P62081 194 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 GSTM4Q03013 218 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 ABHD18Q0P651 414 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 C1orf53Q5VUE5 145 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 Q6ZNB5 142 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF683Q8IZ20 524 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 NACC2Q96BF6 587 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 ADI1Q9BV57 179 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 PRRG3Q9BZD7 231 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 EHD3Q9NZN3 535 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 PCDHB11Q9Y5F2 797 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 TET1Q8NFU7 2136 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 DICER1Q9UPY3 1922 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 TCRBV21S2A2A0A5A6 115 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 ARHGEF33A8MVX0 844 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 H6PDO95479 791 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 IGFBP5P24593 272 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 CCR4P51679 360 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 PIGFQ07326 219 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 LAPTM4AQ15012 233 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 DDI2Q5TDH0 399 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 LILRA6Q6PI73 481 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 CHERPQ8IWX8 916 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 PDPRQ8NCN5 879 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 BIRC7Q96CA5 298 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZHX1-C8orf76Q96EF9 292 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 FBXL20Q96IG2 436 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 CITED4Q96RK1 184 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 PKP4Q99569 1192 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 RBM4BQ9BQ04 359 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 FNDC11Q9BVV2 318 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 RBM4Q9BWF3 364 aaKnown RBP11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 ATP6V1HQ9UI12 483 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 IKZF3Q9UKT9 509 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 LOC285556D6RIA3 1793 aa11.16□□□□□ -0.62
TRAPPC9-202ENST00000438773 E7EQ34 232 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 NT5EP21589 574 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 SMIM11AP58511 58 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 DGUOKQ16854 277 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 RASGEF1AQ8N9B8 481 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 TMIEQ8NEW7 156 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 HUS1BQ8NHY5 278 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 TESMINQ9Y4I5 508 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 RLFQ13129 1914 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 B4DGG1 531 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 VNN2O95498 520 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 IFNW1P05000 195 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 ZNF182P17025 639 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 CPN2P22792 545 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 ITGB8P26012 769 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 PDHA2P29803 388 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 IFNGR2P38484 337 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 C5orf22Q49AR2 442 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 SPANXN2Q5MJ10 180 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 C9orf50Q5SZB4 431 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 ARMCX6Q7L4S7 300 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 TRIM69Q86WT6 500 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 CROCCP3Q8IVE0 287 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 GPR135Q8IZ08 494 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 MINDY1Q8N5J2 469 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 FOXJ1Q92949 421 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 ASB16Q96NS5 453 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 DEPDC7Q96QD5 511 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 RDH14Q9HBH5 336 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 KLHL42Q9P2K6 505 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 DKK3Q9UBP4 350 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 SNX7Q9UNH6 387 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 AP3D1O14617 1153 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 SERPINI2O75830 405 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 TNFP01375 233 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 OPN1SWP03999 348 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 STX4Q12846 297 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 CBLBQ13191 982 aa11.15□□□□□ -0.62
TRAPPC9-202ENST00000438773 ASB11Q8WXH4 323 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms