RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 KLHL1Q9NR64 748 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 TMEM184CQ9NVA4 438 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 TAS2R13Q9NYV9 303 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 GALPQ9UBC7 116 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 DHRS7Q9Y394 339 aa7.33□□□□□ -1.24
VPS50-203ENST00000436177 KLF2Q9Y5W3 355 aaPredicted RBP7.33□□□□□ -1.24
VPS50-203ENST00000436177 ANKRD17O75179 2603 aaKnown RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 ANKRD12Q6UB98 2062 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 KCNE1BA0A087WTH5 132 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 IGHV3-20A0A0C4DH32 117 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 ZNF860A6NHJ4 632 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 GFYI3L273 518 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 SGK494L7N484 410 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 PSMD12O00232 456 aaPredicted RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 PGRMC1O00264 195 aaKnown RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 NDUFS4O43181 175 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 RDH16O75452 317 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 CDC123O75794 336 aaPredicted RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 F7P08709 466 aaPredicted RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 CDH1P12830 882 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 ABOP16442 354 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 PGAM1P18669 254 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 IL10P22301 178 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 HTR1EP28566 365 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 COILP38432 576 aaPredicted RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 BCL6P41182 706 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 CA7P43166 264 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 CCR8P51685 355 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 TDGF1P3P51864 188 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 OR4D2P58180 307 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 MPP1Q00013 466 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 ALDH6A1Q02252 535 aaKnown RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 RGS1Q08116 209 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 NAE1Q13564 534 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 PPP1R7Q15435 360 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 OR1C1Q15619 314 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 MEP1AQ16819 746 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 ZXDCQ2QGD7 858 aaPredicted RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 SFT2D3Q587I9 215 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 HSP90AA5PQ58FG0 334 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 ANKRD22Q5VYY1 191 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 ZNF324BQ6AW86 544 aaPredicted RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 FCRLBQ6BAA4 426 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 SP5Q6BEB4 398 aaPredicted RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 CAPN13Q6MZZ7 669 aaPredicted RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 PAPD4Q6PIY7 484 aaKnown RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 AGTRAPQ6RW13 159 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 BNC2Q6ZN30 1099 aaPredicted RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 MRGPRGQ86SM5 289 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 CAND1Q86VP6 1230 aaKnown RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 EID3Q8N140 333 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 BEST3Q8N1M1 668 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 MCUQ8NE86 351 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 ATL1Q8WXF7 558 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 LINGO1Q96FE5 620 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 IMMP1LQ96LU5 166 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 SERPINB12Q96P63 405 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 OR1F2PQ96R84 312 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 CYTH2Q99418 400 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 SLC30A3Q99726 388 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 RBCK1Q9BYM8 510 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 UNKQ9C0B0 810 aaKnown RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 PARVBQ9HBI1 364 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 GPAMQ9HCL2 828 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 PRM3Q9NNZ6 103 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 PPANQ9NQ55 473 aaKnown RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 IARS2Q9NSE4 1012 aaKnown RBP7.32□□□□□ -1.24
VPS50-203ENST00000436177 ARL15Q9NXU5 204 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 ASIC3Q9UHC3 531 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 NAALAD2Q9Y3Q0 740 aa7.32□□□□□ -1.24
VPS50-203ENST00000436177 MDC1Q14676 2089 aaKnown RBP7.31□□□□□ -1.24
VPS50-203ENST00000436177 APCP25054 2843 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 ZCWPW2A0A1B0GU75 182 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 URADA6NGE7 173 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 GABRR3A8MPY1 467 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 NDC80O14777 642 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 OR1F1O43749 312 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 TTC4O95801 387 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 ZNF24P17028 368 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 PTGER4P35408 488 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 AP1S2P56377 157 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 IL2P60568 153 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 CSNK1G2P78368 415 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 PMP22Q01453 160 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 SRSF11Q05519 484 aaKnown RBP7.31□□□□□ -1.24
VPS50-203ENST00000436177 CRYMQ14894 314 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 TMEM214Q6NUQ4 689 aaKnown RBP7.31□□□□□ -1.24
VPS50-203ENST00000436177 ZNF549Q6P9A3 640 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 CCDC137Q6PK04 289 aaKnown RBP7.31□□□□□ -1.24
VPS50-203ENST00000436177 XKRXQ6PP77 449 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 ZNF662Q6ZS27 426 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 ABHD13Q7L211 337 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 PRSS41Q7RTY9 318 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 VN1R4Q7Z5H5 301 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 ANKRD37Q7Z713 158 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 GAS2L3Q86XJ1 694 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 PPIL6Q8IXY8 311 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 GPATCH11Q8N954 259 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 M1APQ8TC57 530 aa7.31□□□□□ -1.24
VPS50-203ENST00000436177 ITLN2Q8WWU7 325 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms