RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 QPRTQ15274 297 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 MARCH8Q5T0T0 291 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 NKAIN2Q5VXU1 208 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 OR4C6Q8NH72 309 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 RETREG1Q9H6L5 497 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 SRPK3Q9UPE1 567 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-203ENST00000434735 CBSLP0DN79 551 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 NR2C1P13056 603 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 IL1R2P27930 398 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 CBSP35520 551 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 POLR2JP52435 117 aaKnown RBP11.74□□□□□ -0.53
UBE3B-203ENST00000434735 CACNA2D1P54289 1103 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 HMGCS1Q01581 520 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 PUDPQ08623 228 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 FSTL4Q6MZW2 842 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 KBTBD2Q8IY47 623 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 PLEKHG4BQ96PX9 1271 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 NPLQ9BXD5 320 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-203ENST00000434735 ACSS3Q9H6R3 686 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 EPHA6Q9UF33 1036 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 COQ4Q9Y3A0 265 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 C4AP0C0L4 1744 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 MAGEB17A8MXT2 336 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 TEX46H3BTG2 121 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 ITGB7P26010 798 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 CLCN4P51793 760 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 NRF1Q16656 503 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 UBAP2Q5T6F2 1119 aaKnown RBP11.74□□□□□ -0.53
UBE3B-203ENST00000434735 PGBD2Q6P3X8 592 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 OR51V1Q9H2C8 321 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 SAMD4AQ9UPU9 718 aaKnown RBP11.74□□□□□ -0.53
UBE3B-203ENST00000434735 PRSS38A1L453 326 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 ZBTB11O95625 1053 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-203ENST00000434735 MYCLP1P12525 358 aaPredicted RBP11.74□□□□□ -0.53
UBE3B-203ENST00000434735 XKP51811 444 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 OLIG2Q13516 323 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 ERV3-1Q14264 604 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 SWI5Q1ZZU3 235 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 ZNF423Q2M1K9 1284 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 PKDCCQ504Y2 493 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 FIP1L1Q6UN15 594 aaKnown RBP11.74□□□□□ -0.53
UBE3B-203ENST00000434735 MEIOBQ8N635 442 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 LRRC17Q8N6Y2 441 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 C3orf58Q8NDZ4 430 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 OR2T12Q8NG77 320 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 LYARQ9NX58 379 aaKnown RBP11.74□□□□□ -0.53
UBE3B-203ENST00000434735 U3KQV3 271 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
UBE3B-203ENST00000434735 LRRC10BA6NIK2 292 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 PSMD11O00231 422 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 CHST10O43529 356 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 TNFSF15O95150 251 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 RLN1P04808 185 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 FAM153BP0C7A2 387 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 CPOXP36551 454 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 CLRN1P58418 232 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 RPS15AP62244 130 aaKnown RBP11.73□□□□□ -0.53
UBE3B-203ENST00000434735 SNAPC1Q16533 368 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 ANKRD22Q5VYY1 191 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 TTC27Q6P3X3 843 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 GALNTL5Q7Z4T8 443 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 SPATA19Q7Z5L4 167 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 ZNF433Q8N7K0 673 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-203ENST00000434735 C11orf65Q8NCR3 313 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 KCNE4Q8WWG9 221 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 TMEM234Q8WY98 164 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 TESCQ96BS2 214 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 RNF38Q9H0F5 515 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 DYNLRB1Q9NP97 96 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 TAAR2Q9P1P5 351 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 ZNF222Q9UK12 451 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 POFUT2Q9Y2G5 429 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
UBE3B-203ENST00000434735 IGKV6-21A0A0C4DH24 114 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 DBTP11182 482 aaKnown RBP11.73□□□□□ -0.53
UBE3B-203ENST00000434735 GABRB2P47870 512 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 RPS14P62263 151 aaKnown RBP11.73□□□□□ -0.53
UBE3B-203ENST00000434735 SHC2P98077 582 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 RIPK1Q13546 671 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 MED22Q15528 200 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 AAGABQ6PD74 315 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 OR4N5Q8IXE1 308 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 FBXW8Q8N3Y1 598 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 MAGEE1Q9HCI5 957 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 EGFL7Q9UHF1 273 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 DUOX1Q9NRD9 1551 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 A0A1W2PPL8 197 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 TRIM38O00635 465 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 METTL18O95568 372 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 MTTPP55157 894 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 VBP1P61758 197 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 TRAP1Q12931 704 aaKnown RBP11.73□□□□□ -0.53
UBE3B-203ENST00000434735 CATSPEREQ5SY80 951 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 FRG2Q64ET8 278 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 ERICH5Q6P6B1 374 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 HTR3DQ70Z44 454 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 KIAA0907Q7Z7F0 614 aaPredicted RBP11.73□□□□□ -0.53
UBE3B-203ENST00000434735 MINDY1Q8N5J2 469 aa11.73□□□□□ -0.53
UBE3B-203ENST00000434735 ANKFN1Q8N957 763 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms