RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 TRAP1Q12931 704 aaKnown RBP2.65□□□□□ -1.99
PTPN4-205ENST00000433888 VEZF1Q14119 521 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 IL11RAQ14626 422 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 ATAD3CQ5T2N8 411 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 C9orf66Q5T8R8 295 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 AGAP7PQ5VUJ5 663 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 OR4A47Q6IF82 309 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 CAVIN1Q6NZI2 390 aaKnown RBP2.65□□□□□ -1.99
PTPN4-205ENST00000433888 DCLRE1AQ6PJP8 1040 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 PP632Q6XCG6 107 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 GPC2Q8N158 579 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 SPPL2AQ8TCT8 520 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 MGARPQ8TDB4 240 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 TEKT4Q8WW24 435 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 PRPF31Q8WWY3 499 aaKnown RBP2.65□□□□□ -1.99
PTPN4-205ENST00000433888 PTERQ96BW5 349 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 TMCO6Q96DC7 493 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 SERAC1Q96JX3 654 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 SPATA17Q96L03 361 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 LINC00615Q96LM1 132 aaPredicted RBP2.65□□□□□ -1.99
PTPN4-205ENST00000433888 DGAT2Q96PD7 388 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 CDCA3Q99618 268 aaPredicted RBP2.65□□□□□ -1.99
PTPN4-205ENST00000433888 OCR1Q9BZK8 76 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 RABEP2Q9H5N1 569 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.65□□□□□ -1.991e-6■■■■□ 23.3
PTPN4-205ENST00000433888 CLEC5AQ9NY25 188 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 ANAPC5Q9UJX4 755 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 NAALAD2Q9Y3Q0 740 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 POGZQ7Z3K3 1410 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 IGSF1Q8N6C5 1336 aa2.65□□□□□ -1.99
PTPN4-205ENST00000433888 A0A1W2PPK0 400 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 CASTOR2A6NHX0 329 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 PENKP01210 267 aaPredicted RBP2.64□□□□□ -1.99
PTPN4-205ENST00000433888 ABCB1P08183 1280 aaPredicted RBP2.64□□□□□ -1.99
PTPN4-205ENST00000433888 MYBL1P10243 752 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 VDRP11473 427 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 LMO2P25791 158 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 LIG4P49917 911 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 OR1D5P58170 312 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 ERVK-16P61578 105 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 SCARB2Q14108 478 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 NFE2L1Q14494 772 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 COG2Q14746 738 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 Q1RN00 199 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 TRAT1Q6PIZ9 186 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 THNSL1Q8IYQ7 743 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 CCDC170Q8IYT3 715 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 OR8H3Q8N146 312 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 SLC4A11Q8NBS3 891 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 SNX21Q969T3 373 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 RMDN1Q96DB5 314 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 FER1L6-AS2Q96M78 137 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 CCDC106Q9BWC9 280 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 PRMT7Q9NVM4 692 aaPredicted RBP2.64□□□□□ -1.99
PTPN4-205ENST00000433888 PPIEQ9UNP9 301 aaKnown RBP2.64□□□□□ -1.99
PTPN4-205ENST00000433888 SNX5Q9Y5X3 404 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 POMT1Q9Y6A1 747 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 RPGRIP1LQ68CZ1 1315 aa2.64□□□□□ -1.99
PTPN4-205ENST00000433888 LOC100509620A0A075B734 347 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 TRBC2A0A5B9 178 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 MTMR11A4FU01 709 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 GLOD5A6NK44 160 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 CCL24O00175 119 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 RNF103O00237 685 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 SLC7A4O43246 635 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 SH3BGRLO75368 114 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 SLU7O95391 586 aaKnown RBP2.63□□□□□ -1.99
PTPN4-205ENST00000433888 LY6G6DO95868 133 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 PTMSP20962 102 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 AADACP22760 399 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 NPY4RP50391 375 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 RAD23AP54725 363 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 CLDN15P56746 228 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 C17orf67Q0P5P2 114 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 SIX1Q15475 284 aaPredicted RBP2.63□□□□□ -1.99
PTPN4-205ENST00000433888 UPP1Q16831 310 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 CBWD6Q4V339 395 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 CBWD3Q5JTY5 395 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 C9orf152Q5JTZ5 239 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 UTF1Q5T230 341 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 FAM43BQ6ZT52 329 aaPredicted RBP2.63□□□□□ -1.99
PTPN4-205ENST00000433888 GET4Q7L5D6 327 aaPredicted RBP2.63□□□□□ -1.99
PTPN4-205ENST00000433888 KRT74Q7RTS7 529 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 MAML2Q8IZL2 1156 aaPredicted RBP2.63□□□□□ -1.99
PTPN4-205ENST00000433888 CARNMT1Q8N4J0 409 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 POMGNT2Q8NAT1 580 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 C11orf52Q96A22 123 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 SEPHS2Q99611 448 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 UBAC1Q9BSL1 405 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 NAA11Q9BSU3 229 aaPredicted RBP2.63□□□□□ -1.99
PTPN4-205ENST00000433888 PI4K2AQ9BTU6 479 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 TEX12Q9BXU0 123 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 ZWILCHQ9H900 591 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 GIMAP4Q9NUV9 329 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 NLGN3Q9NZ94 848 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 CRNNQ9UBG3 495 aaPredicted RBP2.63□□□□□ -1.99
PTPN4-205ENST00000433888 DNAJB9Q9UBS3 223 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 IL17BQ9UHF5 180 aa2.63□□□□□ -1.99
PTPN4-205ENST00000433888 TRAV34A0A0B4J273 112 aa2.62□□□□□ -1.99
PTPN4-205ENST00000433888 IGHV3-16A0A0C4DH30 117 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms