RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ZNF282Q9UDV7 671 aaPredicted RBP13.4□□□□□ -0.26
HOXC4-202ENST00000430889 RPS6KA6Q9UK32 745 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 CORO2BQ9UQ03 480 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 STON1Q9Y6Q2 735 aa13.4□□□□□ -0.26
HOXC4-202ENST00000430889 C5orf42Q9H799 3197 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 HEATR5BQ9P2D3 2071 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 EPOPA6NHQ4 379 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 E9PQ18 207 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 NOBOXO60393 691 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 NUDT7P0C024 238 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 ITGAMP11215 1152 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 JUNBP17275 347 aaPredicted RBP13.39□□□□□ -0.27
HOXC4-202ENST00000430889 ELK4P28324 431 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 TRIM23P36406 574 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 PBX2P40425 430 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 VLDLRP98155 873 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 PPP1R8Q12972 351 aaKnown RBP13.39□□□□□ -0.27
HOXC4-202ENST00000430889 SPIDRQ14159 915 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 CST6Q15828 149 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 HIST2H2ACQ16777 129 aaPredicted RBP13.39□□□□□ -0.27
HOXC4-202ENST00000430889 RFX4Q33E94 735 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 LRRC23Q53EV4 343 aaPredicted RBP13.39□□□□□ -0.27
HOXC4-202ENST00000430889 RBM48Q5RL73 367 aaKnown RBP13.39□□□□□ -0.27
HOXC4-202ENST00000430889 HIST2H2AA3Q6FI13 130 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 OR2T5Q6IEZ7 315 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF773Q6PK81 442 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 OR2T29Q8NH02 315 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 OR5K2Q8NHB8 316 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 HDAC2Q92769 488 aaKnown RBP13.39□□□□□ -0.27
HOXC4-202ENST00000430889 UBE2E3Q969T4 207 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 FAM131CQ96AQ9 280 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 MTERF3Q96E29 417 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 C7orf34Q96L11 122 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 DOK1Q99704 481 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 BARD1Q99728 777 aaKnown RBP13.39□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF717Q9BY31 904 aaPredicted RBP13.39□□□□□ -0.27
HOXC4-202ENST00000430889 RHBGQ9H310 441 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 OR51B5Q9H339 312 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 PELI2Q9HAT8 420 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 WASH6PQ9NQA3 447 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 SERGEFQ9UGK8 458 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 FZD4Q9ULV1 537 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 VPS4AQ9UN37 437 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 ASF1AQ9Y294 204 aa13.39□□□□□ -0.27
HOXC4-202ENST00000430889 GNG14A0A1W2PPG7 69 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 A0A1W2PPV9 198 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 TRIM64BA6NI03 449 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 PRR19A6NJB7 356 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 GPR89AB7ZAQ6 455 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 GNGT2O14610 69 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 GPR37L1O60883 481 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 TNFRSF21O75509 655 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 TGFB1P01137 390 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 PCCBP05166 539 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 GPR89BP0CG08 455 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 PRKACGP22612 351 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 CRHBPP24387 322 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 POLR2IP36954 125 aaKnown RBP13.38□□□□□ -0.27
HOXC4-202ENST00000430889 HBA1P69905 142 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 MEF2AQ02078 507 aaPredicted RBP13.38□□□□□ -0.27
HOXC4-202ENST00000430889 DMPKQ09013 629 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 FGL2Q14314 439 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 CTU2Q2VPK5 515 aaKnown RBP13.38□□□□□ -0.27
HOXC4-202ENST00000430889 COL13A1Q5TAT6 717 aaPredicted RBP13.38□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF852Q6ZMS4 543 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 CEP68Q76N32 757 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 LPCAT2Q7L5N7 544 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 VTCN1Q7Z7D3 282 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 GALNT10Q86SR1 603 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 C8orf59Q8N0T1 100 aaPredicted RBP13.38□□□□□ -0.27
HOXC4-202ENST00000430889 CHDHQ8NE62 594 aaPredicted RBP13.38□□□□□ -0.27
HOXC4-202ENST00000430889 VPS37AQ8NEZ2 397 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 ABHD11Q8NFV4 315 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 TFGQ92734 400 aaPredicted RBP13.38□□□□□ -0.27
HOXC4-202ENST00000430889 HSH2DQ96JZ2 352 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 MYADMQ96S97 322 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 NRTNQ99748 197 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 MBNL1Q9NR56 388 aaKnown RBP13.38□□□□□ -0.27
HOXC4-202ENST00000430889 TM7SF3Q9NS93 570 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 C3orf18Q9UK00 162 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 PLAGL1Q9UM63 463 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 ZFR2Q9UPR6 939 aaKnown RBP13.38□□□□□ -0.27
HOXC4-202ENST00000430889 PCDHGA8Q9Y5G5 932 aa13.38□□□□□ -0.27
HOXC4-202ENST00000430889 CCDC160A6NGH7 325 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TRMUO75648 421 aaKnown RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF682O95780 498 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 RPL3P39023 403 aaKnown RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 YAP1P46937 504 aaKnown RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ITGA1P56199 1179 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ISL1P61371 349 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 KCNJ10P78508 379 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 MC1RQ01726 317 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 EEF1A2Q05639 463 aaKnown RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 PMS2P3Q13401 168 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 DYNC1I2Q13409 638 aaKnown RBP13.37□□□□□ -0.27
HOXC4-202ENST00000430889 IL18R1Q13478 541 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 ZNF691Q5VV52 312 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 KDM4DQ6B0I6 523 aa13.37□□□□□ -0.27
HOXC4-202ENST00000430889 TMIGD1Q6UXZ0 262 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms