RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 FEZF1A0PJY2 475 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 CTAGE9A4FU28 777 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 GFYI3L273 518 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 MPC1LP0DKB6 136 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 ENO3P13929 434 aaPredicted RBP17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 CD1EP15812 388 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 PAMP19021 973 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 TPP2P29144 1249 aaPredicted RBP17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 SKIV2L2P42285 1042 aaKnown RBP17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 KRTAP21-3Q3LHN1 58 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 ZNF470Q6ECI4 717 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 CASC4Q6P4E1 433 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 C4orf22Q6V702 233 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 UBE2R2Q712K3 238 aaPredicted RBP17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 ASPGQ86U10 573 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 SLC26A11Q86WA9 606 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 SLC13A3Q8WWT9 602 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 TMEM125Q96AQ2 219 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 OR1F2PQ96R84 312 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 TREX2Q9BQ50 279 aaPredicted RBP17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 TSGA10Q9BZW7 698 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 CCDC68Q9H2F9 335 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 LANCL2Q9NS86 450 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 DNAJC13O75165 2243 aa17.19■□□□□ 0.34
UPK3BP1-201ENST00000428678 ACANP16112 2415 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 TFECO14948 347 aaPredicted RBP17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 TPOP07202 933 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 IL10P22301 178 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 PTGS2P35354 604 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 CYB561P49447 251 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 ZNF75DP51815 510 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 TERF1P54274 439 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 CEP128Q6ZU80 1094 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 PIWIL4Q7Z3Z4 852 aaKnown RBP17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 CD163Q86VB7 1156 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 C17orf64Q86WR6 236 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 CYP4X1Q8N118 509 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 OR5T3Q8NGG3 340 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 ELP5Q8TE02 316 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 TM4SF19Q96DZ7 209 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 BAG1Q99933 345 aaPredicted RBP17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 FBXO6Q9NRD1 293 aaPredicted RBP17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 KLHL42Q9P2K6 505 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 SH2B3Q9UQQ2 575 aa17.18■□□□□ 0.34
UPK3BP1-201ENST00000428678 LCMT2O60294 686 aaKnown RBP17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 SLC35G6P0C7Q6 338 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 RFC3P40938 356 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 HCFC1P51610 2035 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 ITGA8P53708 1063 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 CDK16Q00536 496 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 RPS6KA1Q15418 735 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 CCNG2Q16589 344 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 CAPN13Q6MZZ7 669 aaPredicted RBP17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 CYHR1Q6ZMK1 362 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 CPNE9Q8IYJ1 553 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 FAM57AQ8TBR7 257 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 KCNJ9Q92806 393 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 ALKBH8Q96BT7 664 aaKnown RBP17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 GPR21Q99679 349 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 PCBD2Q9H0N5 130 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 MED16Q9Y2X0 877 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 DHRS7Q9Y394 339 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 SLC22A7Q9Y694 548 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 ZNF407Q9C0G0 2248 aa17.17■□□□□ 0.34
UPK3BP1-201ENST00000428678 ABCA4P78363 2273 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 A0A1B0GTH9 108 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 TCRBV7S3A2A0A539 114 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 FAM90A27PA6NNH2 459 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 CDK2AP1O14519 115 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 CDC40O60508 579 aaKnown RBP eCLIP17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 AVILO75366 819 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 FHP07954 510 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 CDH1P12830 882 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 TPSB2P20231 275 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 GRK3P35626 688 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 MEOX1P50221 254 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 ART1P52961 327 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 MPP1Q00013 466 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 CTBP1Q13363 440 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 THOC5Q13769 683 aaKnown RBP17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 HERC3Q15034 1050 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 SIX1Q15475 284 aaPredicted RBP17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 TPSAB1Q15661 275 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 KCTD19Q17RG1 926 aaPredicted RBP17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 ZNF549Q6P9A3 640 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 ZNF227Q86WZ6 799 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 DENND6AQ8IWF6 608 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 POGLUT1Q8NBL1 392 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 CD200R1Q8TD46 325 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 ASB5Q8WWX0 329 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 TBC1D20Q96BZ9 403 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 FAM129AQ9BZQ8 928 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 SAMD15Q9P1V8 674 aa17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 KLF13Q9Y2Y9 288 aaPredicted RBP17.16■□□□□ 0.34
UPK3BP1-201ENST00000428678 NKX2-6A6NCS4 301 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 FOXO6A8MYZ6 492 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 B4GALT2O60909 372 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 NADKO95544 446 aaPredicted RBP17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 IGFBP2P18065 325 aa17.15■□□□□ 0.34
UPK3BP1-201ENST00000428678 JAK1P23458 1154 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms