RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SPTBP11277 2137 aa23.29■■□□□ 1.32
VEGFA-209ENST00000425836 ANKDD1BA6NHY2 528 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 H0YIV9 168 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 TM9SF1O15321 606 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 FOXS1O43638 330 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 TRIM13O60858 407 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 CLEC3AO75596 197 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 MLYCDO95822 493 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 SERPINA6P08185 405 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 AGXTP21549 392 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 FAM53BQ14153 422 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 VASH2Q86V25 355 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 METTL27Q8N6F8 245 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-209ENST00000425836 CT55Q8WUE5 264 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 SH3GL2Q99962 352 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 GATA5Q9BWX5 397 aaPredicted RBP23.28■■□□□ 1.32
VEGFA-209ENST00000425836 AICDAQ9GZX7 198 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 CROTQ9UKG9 612 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 ZMIZ1Q9ULJ6 1067 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 SSUH2Q9Y2M2 353 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 PCDHGA11Q9Y5H2 935 aa23.28■■□□□ 1.32
VEGFA-209ENST00000425836 TERTO14746 1132 aaKnown RBP23.27■■□□□ 1.32
VEGFA-209ENST00000425836 TBX6O95947 436 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-209ENST00000425836 PCNAP12004 261 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 TCN2P20062 427 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 OR1D4P47884 311 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 NAA20P61599 178 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 LCP2Q13094 533 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 SRSF6Q13247 344 aaKnown RBP23.27■■□□□ 1.32
VEGFA-209ENST00000425836 ZRSR2Q15696 482 aaKnown RBP23.27■■□□□ 1.32
VEGFA-209ENST00000425836 NKAIN1Q4KMZ8 207 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 LETMD1Q6P1Q0 360 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 ZCCHC10Q8TBK6 192 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 ZNF473Q8WTR7 871 aaKnown RBP23.27■■□□□ 1.32
VEGFA-209ENST00000425836 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.27■■□□□ 1.32
VEGFA-209ENST00000425836 CCT6BQ92526 530 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 ZNF382Q96SR6 550 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 DRC3Q9H069 523 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 SLC22A11Q9NSA0 550 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 ZNF446Q9NWS9 450 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 SLC22A7Q9Y694 548 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 MAU2Q9Y6X3 613 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 CHD8Q9HCK8 2581 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 A0A087WV48 116 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 ZWINTO95229 277 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 ONECUT2O95948 504 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 CAPN1P07384 714 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 BPGMP07738 259 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 ATXN8OSP0DMR3 200 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 GGTA1PQ4G0N0 100 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 CFAP157Q5JU67 520 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 PRMT9Q6P2P2 845 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 LRRC69Q6ZNQ3 347 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 FRMD7Q6ZUT3 714 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 SYVN1Q86TM6 617 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 MVB12AQ96EY5 273 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 KLHL31Q9H511 634 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 TSC22D4Q9Y3Q8 395 aa23.27■■□□□ 1.32
VEGFA-209ENST00000425836 AHCTF1Q8WYP5 2266 aa23.27■■□□□ 1.31
VEGFA-209ENST00000425836 APC2O95996 2303 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 A0A0A6YYC8 382 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-209ENST00000425836 I3L1I5 382 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-209ENST00000425836 F8A1P23610 371 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 DLSTP36957 453 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 CCR10P46092 362 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 SERPINB4P48594 390 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 TTMPQ5BVD1 217 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 FAM198BQ6UWH4 519 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 GPRIN3Q6ZVF9 776 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 AFAP1L2Q8N4X5 818 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 HUS1BQ8NHY5 278 aa23.26■■□□□ 1.31
VEGFA-209ENST00000425836 MAGEB10Q96LZ2 347 aaPredicted RBP23.26■■□□□ 1.31
VEGFA-209ENST00000425836 CELSR3Q9NYQ7 3312 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 TMEM120BA0PK00 339 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 LRIT2A6NDA9 550 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 UBFD1O14562 309 aaKnown RBP23.25■■□□□ 1.31
VEGFA-209ENST00000425836 OR4F21O95013 312 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 DHRS4L1P0CG22 281 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 LIFP15018 202 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 ITPKBP27987 946 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 HNRNPH1P31943 449 aaKnown RBP23.25■■□□□ 1.31
VEGFA-209ENST00000425836 TLE3Q04726 772 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 ASPHQ12797 758 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 SLC9A5Q14940 896 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 TOR1AIP1Q5JTV8 583 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 PRSS41Q7RTY9 318 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 OR9A4Q8NGU2 314 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 WDR20Q8TBZ3 569 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 UTP15Q8TED0 518 aaKnown RBP23.25■■□□□ 1.31
VEGFA-209ENST00000425836 KIAA1143Q96AT1 154 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-209ENST00000425836 REPS1Q96D71 796 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 ATP6V1G3Q96LB4 118 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 GPN2Q9H9Y4 310 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-209ENST00000425836 ZNF304Q9HCX3 659 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 IFT80Q9P2H3 777 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-209ENST00000425836 IL17BQ9UHF5 180 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 TRPS1Q9UHF7 1281 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 ADGRE2Q9UHX3 823 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 CDC14AQ9UNH5 594 aa23.25■■□□□ 1.31
VEGFA-209ENST00000425836 STK38LQ9Y2H1 464 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms