RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 CEP128Q6ZU80 1094 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 SLC26A11Q86WA9 606 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CHDHQ8NE62 594 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 FAM57AQ8TBR7 257 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TP63Q9H3D4 680 aaPredicted RBP11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TIMMDC1Q9NPL8 285 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 TRMT6Q9UJA5 497 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 GUCA1BQ9UMX6 200 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 NEU2Q9Y3R4 380 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 FER1L5A0AVI2 2057 aa11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 MDC1Q14676 2089 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 PRRC2CQ9Y520 2896 aaKnown RBP11.53□□□□□ -0.56
HLA-DQB3-203ENST00000425319 DIDO1Q9BTC0 2240 aaKnown RBP11.52□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CCDC88CQ9P219 2028 aa11.52□□□□□ -0.56
HLA-DQB3-203ENST00000425319 CELSR2Q9HCU4 2923 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FAM237BA0A1B0GVD1 139 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ACOT7O00154 380 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 P2RX6O15547 441 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 OR1F1O43749 312 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 RDH16O75452 317 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CDC123O75794 336 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NADKO95544 446 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MLNP12872 115 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ALOX12P18054 663 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HPDP32754 393 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CLCN2P51788 898 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CLCN7P51798 805 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZNF75DP51815 510 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NAE1Q13564 534 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CUL1Q13616 776 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CSHL1Q14406 222 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 AGTRAPQ6RW13 159 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 LCTLQ6UWM7 567 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CENPUQ71F23 418 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PRUNE1Q86TP1 453 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TMEM200AQ86VY9 491 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MFSD9Q8NBP5 474 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KCT2Q8NC54 265 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 C7orf57Q8NEG2 295 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ELP5Q8TE02 316 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TM4SF19Q96DZ7 209 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 LRRC46Q96FV0 321 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FAR2Q96K12 515 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PARVBQ9HBI1 364 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 C20orf96Q9NUD7 363 aaPredicted RBP11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TAS2R13Q9NYV9 303 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ERVK-11Q9UQG0 969 aa11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 REXO2Q9Y3B8 237 aaKnown RBP11.52□□□□□ -0.57
HLA-DQB3-203ENST00000425319 A0A088AWK7 358 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 A0A1B0GTH9 108 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FEZF1A0PJY2 475 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FAM47E-STBD1D6RA91 191 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 C19orf84I3L1E1 186 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CLDN4O14493 209 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NDUFS4O43181 175 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CHST10O43529 356 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PEX1O43933 1283 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 B4GALT2O60909 372 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 H2AFYO75367 372 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 NEURL1O76050 574 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZWINTO95229 277 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 STATHP02808 62 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZNF10P21506 573 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TPP2P29144 1249 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 IMPA1P29218 277 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TBPL1P62380 186 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PPP2R2AP63151 447 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PLGLB1Q02325 96 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MYBPHQ13203 477 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 SP140Q13342 867 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 KRTAP21-3Q3LHN1 58 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 C3P1Q6ZMU1 363 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 RGS9BPQ6ZS82 235 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ARHGEF39Q8N4T4 335 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TRPV3Q8NET8 790 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 OR10Q1Q8NGQ4 319 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 LILRB4Q8NHJ6 448 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ZNF669Q96BR6 464 aaPredicted RBP11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 DMRTA2Q96SC8 542 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 GPR21Q99679 349 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TRIM51Q9BSJ1 452 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FAM167BQ9BTA0 163 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 HES7Q9BYE0 225 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 XAB2Q9HCS7 855 aaKnown RBP11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 GALPQ9UBC7 116 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FBXW2Q9UKT8 454 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CENPEQ02224 2701 aa11.51□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PCM1Q15154 2024 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TRBC2A0A5B9 178 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 FGGP02679 453 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 RNH1P13489 461 aaKnown RBP11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 CD99P14209 185 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TRHRP34981 398 aaPredicted RBP11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 PEX19P40855 299 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MEOX1P50221 254 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ART1P52961 327 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 ITGA8P53708 1063 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 TERF1P54274 439 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 MLF1P58340 268 aa11.5□□□□□ -0.57
HLA-DQB3-203ENST00000425319 RHAGQ02094 409 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms