RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 CCDC177Q9NQR7 707 aaPredicted RBP14.08□□□□□ -0.16
ATG4B-209ENST00000425239 NAALAD2Q9Y3Q0 740 aa14.08□□□□□ -0.16
ATG4B-209ENST00000425239 HRH3Q9Y5N1 445 aa14.08□□□□□ -0.16
ATG4B-209ENST00000425239 COMMD10Q9Y6G5 202 aa14.08□□□□□ -0.16
ATG4B-209ENST00000425239 C2CD3Q4AC94 2353 aa14.08□□□□□ -0.16
ATG4B-209ENST00000425239 VPS13CQ709C8 3753 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 CTAGE15A4D2H0 777 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 GABRR3A8MPY1 467 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 MAGEB17A8MXT2 336 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 NPIPA5E9PKD4 350 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 CLDN14O95500 239 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 UQCRHP07919 91 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 EEF1DP29692 281 aaKnown RBP14.07□□□□□ -0.16
ATG4B-209ENST00000425239 SLC26A5P58743 744 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 MPP1Q00013 466 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 ALDH6A1Q02252 535 aaKnown RBP14.07□□□□□ -0.16
ATG4B-209ENST00000425239 ABRAXAS2Q15018 415 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 NSDHLQ15738 373 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 SLC25A25Q6KCM7 469 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 AGTRAPQ6RW13 159 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 GALNTL5Q7Z4T8 443 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.07□□□□□ -0.16
ATG4B-209ENST00000425239 ASPGQ86U10 573 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 CTAGE6Q86UF2 777 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 LGI4Q8N135 537 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 MFSD9Q8NBP5 474 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 SPC24Q8NBT2 197 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 CAMKVQ8NCB2 501 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 ZNF740Q8NDX6 193 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 ABHD11Q8NFV4 315 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 MCOLN3Q8TDD5 553 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 MAIP1Q8WWC4 291 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 PEX11GQ96HA9 241 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 OR4K3Q96R72 315 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 OR1F2PQ96R84 312 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 FAM129AQ9BZQ8 928 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 PCBD2Q9H0N5 130 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 ATG10Q9H0Y0 220 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 ANKHQ9HCJ1 492 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 FBXO5Q9UKT4 447 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 NPIPA1Q9UND3 350 aa14.07□□□□□ -0.16
ATG4B-209ENST00000425239 CDK2AP1O14519 115 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 GALR3O60755 368 aaPredicted RBP14.06□□□□□ -0.16
ATG4B-209ENST00000425239 CDC123O75794 336 aaPredicted RBP14.06□□□□□ -0.16
ATG4B-209ENST00000425239 TSPAN12O95859 305 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 B3GALT4O96024 378 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 IL10P22301 178 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 CXCR5P32302 372 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 VPS41P49754 854 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 RIPPLY3P57055 190 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 SARNPP82979 210 aaKnown RBP14.06□□□□□ -0.16
ATG4B-209ENST00000425239 HSF1Q00613 529 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 NAE1Q13564 534 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 THOC5Q13769 683 aaKnown RBP14.06□□□□□ -0.16
ATG4B-209ENST00000425239 PHKG1Q16816 387 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 MFSD4BQ5TF39 518 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 CASC4Q6P4E1 433 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 LCTLQ6UWM7 567 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 LMNTD2Q8IXW0 634 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 KIF2BQ8N4N8 673 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 NFAM1Q8NET5 270 aaPredicted RBP14.06□□□□□ -0.16
ATG4B-209ENST00000425239 ZCCHC10Q8TBK6 192 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 SPOCK3Q9BQ16 436 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 CDCP1Q9H5V8 836 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 PARVBQ9HBI1 364 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 HOMER3Q9NSC5 361 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 MED13LQ71F56 2210 aa14.06□□□□□ -0.16
ATG4B-209ENST00000425239 ZNF860A6NHJ4 632 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 FAM227AF5H4B4 570 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 GOLGA8MH3BSY2 632 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 CEP104O60308 925 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 KRT14P02533 472 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 FHP07954 510 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 SMIM10L1P0DMW3 83 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 ESRRAP11474 423 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-209ENST00000425239 CDH1P12830 882 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 CD46P15529 392 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 TRHRP34981 398 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-209ENST00000425239 SMSP52788 366 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 HSP90AA5PQ58FG0 334 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 PAQR3Q6TCH7 311 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 C17orf64Q86WR6 236 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 RPS19BP1Q86WX3 136 aaKnown RBP14.05□□□□□ -0.16
ATG4B-209ENST00000425239 NAT8LQ8N9F0 302 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 TMEM178AQ8NBL3 297 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 C2CD4AQ8NCU7 369 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-209ENST00000425239 AGAP11Q8TF27 550 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 PHF10Q8WUB8 498 aaKnown RBP14.05□□□□□ -0.16
ATG4B-209ENST00000425239 C14orf79Q96F83 325 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 SMIM10Q96HG1 83 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 LPAR4Q99677 370 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 OLFM1Q99784 485 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 RBCK1Q9BYM8 510 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 SPNS1Q9H2V7 528 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 XAB2Q9HCS7 855 aaKnown RBP14.05□□□□□ -0.16
ATG4B-209ENST00000425239 C20orf96Q9NUD7 363 aaPredicted RBP14.05□□□□□ -0.16
ATG4B-209ENST00000425239 SAMD15Q9P1V8 674 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 LRFN1Q9P244 771 aa14.05□□□□□ -0.16
ATG4B-209ENST00000425239 IGKV3D-11A0A0A0MRZ8 115 aa14.04□□□□□ -0.16
ATG4B-209ENST00000425239 E9PLN8 166 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms