RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 CDC23Q9UJX2 597 aa4.7□□□□□ -1.66
SFXN1-202ENST00000421887 SLC17A4Q9Y2C5 497 aa4.7□□□□□ -1.66
SFXN1-202ENST00000421887 SNX10Q9Y5X0 201 aa4.7□□□□□ -1.66
SFXN1-202ENST00000421887 CSPG4Q6UVK1 2322 aa4.7□□□□□ -1.66
SFXN1-202ENST00000421887 CNTRLQ7Z7A1 2325 aa4.7□□□□□ -1.66
SFXN1-202ENST00000421887 NUP210LQ5VU65 1888 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 A0A0U1RQS6 177 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 A0A1W2PPL8 197 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TSPAN11A1L157 253 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 ZNF785A8K8V0 405 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 FOXO6A8MYZ6 492 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 H3BUI4 141 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CETN3O15182 167 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 SLC16A3O15427 465 aaKnown RBP4.69□□□□□ -1.66
SFXN1-202ENST00000421887 PHGDHO43175 533 aaKnown RBP4.69□□□□□ -1.66
SFXN1-202ENST00000421887 FRS3O43559 492 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 DAB1O75553 588 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 UNC5CO95185 931 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 ZWINTO95229 277 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CALCAP01258 141 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 PYGLP06737 847 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CA5AP35218 305 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 HADHAP40939 763 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CA7P43166 264 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 STT3AP46977 705 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TUBB4BP68371 445 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 DSC2Q02487 901 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 BCL2L1Q07817 233 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 RALGDSQ12967 914 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 AIMP2Q13155 320 aaKnown RBP4.69□□□□□ -1.66
SFXN1-202ENST00000421887 GPS2Q13227 327 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TUBB2AQ13885 445 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 MEA1Q16626 185 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TUBB8Q3ZCM7 444 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CBWD6Q4V339 395 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CBWD3Q5JTY5 395 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 FAM209BQ5JX69 171 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CBWD5Q5RIA9 395 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TMTC4Q5T4D3 741 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 AGAP7PQ5VUJ5 663 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CES4AQ5XG92 561 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TMEM198Q66K66 360 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 DUS1LQ6P1R4 473 aaKnown RBP4.69□□□□□ -1.66
SFXN1-202ENST00000421887 DENND1BQ6P3S1 775 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 KLHL35Q6PF15 583 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CLEC9AQ6UXN8 241 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TMEM26Q6ZUK4 368 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 DPPA4Q7L190 304 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 ZNF683Q8IZ20 524 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 FAM109AQ8N4B1 249 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 C3orf20Q8ND61 904 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 OR8K5Q8NH50 307 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CA5BP1Q8WTZ4 195 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TEKT4Q8WW24 435 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 ZNF606Q8WXB4 792 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 SHC3Q92529 594 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 SCAMP4Q969E2 229 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 ZNF514Q96K75 400 aaPredicted RBP4.69□□□□□ -1.66
SFXN1-202ENST00000421887 AGAP4Q96P64 663 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 ZNF559Q9BR84 538 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TUBB2BQ9BVA1 445 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 FSD1LQ9BXM9 530 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 MYLK2Q9H1R3 596 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 CXXC4Q9H2H0 198 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 OSGEPL1Q9H4B0 414 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.69□□□□□ -1.66
SFXN1-202ENST00000421887 STMN3Q9NZ72 180 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 SEC14L3Q9UDX4 400 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TBC1D29Q9UFV1 150 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 OR12D3Q9UGF7 316 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 BTRCQ9Y297 605 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 RPH3AQ9Y2J0 694 aaPredicted RBP4.69□□□□□ -1.66
SFXN1-202ENST00000421887 TMEM98Q9Y2Y6 226 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 COQ4Q9Y3A0 265 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 PCDHGB3Q9Y5G1 929 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 DOCK10Q96BY6 2186 aa4.69□□□□□ -1.66
SFXN1-202ENST00000421887 NCOA6Q14686 2063 aaPredicted RBP4.69□□□□□ -1.66
SFXN1-202ENST00000421887 H7C1Q1 480 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 PCDH17O14917 1159 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 KIF1CO43896 1103 aaKnown RBP4.68□□□□□ -1.66
SFXN1-202ENST00000421887 PMPCBO75439 489 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 EML2O95834 649 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 JCHAINP01591 159 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 FESP07332 822 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 CD63P08962 238 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 ACP5P13686 325 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 FOLR1P15328 257 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 DNASE1P24855 282 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 TEAD1P28347 426 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 CAPZBP47756 277 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 DGKQP52824 942 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 PPP2R2BQ00005 443 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 BLMHQ13867 455 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 KCNAB1Q14722 419 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 NCF4Q15080 339 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 SLC25A52Q3SY17 297 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 CCDC38Q502W7 563 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 FAM69BQ5VUD6 431 aa4.68□□□□□ -1.66
SFXN1-202ENST00000421887 FAM173BQ6P4H8 233 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms