RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 ULK1O75385 1050 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 ETHE1O95571 254 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 TGFB1P01137 390 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 GSTM2P28161 218 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 HNRNPH1P31943 449 aaKnown RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 PIK3CBP42338 1070 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 MC2RQ01718 297 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 HYAL2Q12891 473 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 EIF3IQ13347 325 aaKnown RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 PDCD2Q16342 344 aaPredicted RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 UGT3A2Q3SY77 523 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 CRLF3Q8IUI8 442 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 GPR135Q8IZ08 494 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 CACTIN-AS1Q8N1I8 211 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 ZNF655Q8N720 491 aaPredicted RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 WDR36Q8NI36 951 aaKnown RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 ZCCHC10Q8TBK6 192 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 MS4A8Q9BY19 250 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 OR51B5Q9H339 312 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 TUBB1Q9H4B7 451 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 SLC39A1Q9NY26 324 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 RARRES3Q9UL19 164 aa14.98□□□□□ -0.01
DDX55-203ENST00000421670 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.98□□□□□ -0.01
DDX55-203ENST00000421670 ZFHX4Q86UP3 3567 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 B4E171 279 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 C4orf51C9J302 202 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 PIP5K1BO14986 540 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 CLEC3AO75596 197 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 CHEK2O96017 543 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 SERPINB1P30740 379 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 TSPAN7P41732 249 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 PHEXP78562 749 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 RGS1Q08116 209 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 PWP1Q13610 501 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 PRTGQ2VWP7 1150 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 TOR1AIP1Q5JTV8 583 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 TCTE1Q5JU00 501 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 PWWP2BQ6NUJ5 590 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 PPP1R3BQ86XI6 285 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 DDIASQ8IXT1 998 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 DTWD1Q8N5C7 304 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 CAMKVQ8NCB2 501 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 NT5CQ8TCD5 201 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 PPP1R36Q96LQ0 422 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 SLC6A16Q9GZN6 736 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 KLHL31Q9H511 634 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 FBXO8Q9NRD0 319 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 SERTAD3Q9UJW9 196 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 MRPS2Q9Y399 296 aaKnown RBP14.97□□□□□ -0.01
DDX55-203ENST00000421670 TSC22D4Q9Y3Q8 395 aa14.97□□□□□ -0.01
DDX55-203ENST00000421670 LRIT2A6NDA9 550 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 SAP18O00422 153 aaKnown RBP14.96□□□□□ -0.01
DDX55-203ENST00000421670 EDF1O60869 148 aaKnown RBP14.96□□□□□ -0.01
DDX55-203ENST00000421670 MED26O95402 600 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 SERPINA6P08185 405 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 VIMP08670 466 aaKnown RBP14.96□□□□□ -0.01
DDX55-203ENST00000421670 LINC00032P0C843 101 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 FGF5P12034 268 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 HMGCS1Q01581 520 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 IL11RAQ14626 422 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 TMEM126BQ8IUX1 230 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 PIWIL2Q8TC59 973 aaKnown RBP14.96□□□□□ -0.01
DDX55-203ENST00000421670 SEC16BQ96JE7 1060 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 C10orf90Q96M02 699 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 F2RL3Q96RI0 385 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 NLNQ9BYT8 704 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 ACPTQ9BZG2 426 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 FGFR1OP2Q9NVK5 253 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 ADGRE2Q9UHX3 823 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 KLK13Q9UKR3 277 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 SLC12A4Q9UP95 1085 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 B3GALT1Q9Y5Z6 326 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 SCN2AQ99250 2005 aa14.96□□□□□ -0.01
DDX55-203ENST00000421670 A0A0G2JN53 185 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 FITM1A5D6W6 292 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 FOXE1O00358 373 aaPredicted RBP14.95□□□□□ -0.02
DDX55-203ENST00000421670 ZNF749O43361 778 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 SCRG1O75711 98 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 B3GALT4O96024 378 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 ZNF888P0CJ79 500 aaPredicted RBP14.95□□□□□ -0.02
DDX55-203ENST00000421670 SPINK2P20155 84 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 RAB15P59190 212 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 RAB8AP61006 207 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 GABREP78334 506 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 BTKQ06187 659 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 CSTF3Q12996 717 aaKnown RBP14.95□□□□□ -0.02
DDX55-203ENST00000421670 GRM7Q14831 915 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 C10orf62Q5T681 223 aaPredicted RBP14.95□□□□□ -0.02
DDX55-203ENST00000421670 KHDRBS2Q5VWX1 349 aaKnown RBP14.95□□□□□ -0.02
DDX55-203ENST00000421670 TMEM214Q6NUQ4 689 aaKnown RBP14.95□□□□□ -0.02
DDX55-203ENST00000421670 CYB5D1Q6P9G0 228 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 ARHGEF39Q8N4T4 335 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 AFAP1L2Q8N4X5 818 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 TTC29Q8NA56 475 aaPredicted RBP14.95□□□□□ -0.02
DDX55-203ENST00000421670 OR8K5Q8NH50 307 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 C19orf60Q96EN9 201 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 CMTM7Q96FZ5 175 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 NUF2Q9BZD4 464 aa14.95□□□□□ -0.02
DDX55-203ENST00000421670 REXO4Q9GZR2 422 aaKnown RBP14.95□□□□□ -0.02
DDX55-203ENST00000421670 ATP6AP2A0A1C7CYW4 349 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms